RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
PTPRE-203ENST00000442830 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.35
PTPRE-203ENST00000442830 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
PTPRE-203ENST00000442830 PPIL2Q13356 520 aa17.2■□□□□ 0.34
PTPRE-203ENST00000442830 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
PTPRE-203ENST00000442830 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
PTPRE-203ENST00000442830 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
PTPRE-203ENST00000442830 PRMT2P55345 433 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 PPATQ06203 517 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 GRIK5Q16478 980 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 FAM151AQ8WW52 585 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 TMEM106CQ9BVX2 250 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 SNCAIPQ9Y6H5 919 aa17.19■□□□□ 0.34
PTPRE-203ENST00000442830 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
PTPRE-203ENST00000442830 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
PTPRE-203ENST00000442830 ATP2B3Q16720 1220 aa17.18■□□□□ 0.34
PTPRE-203ENST00000442830 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
PTPRE-203ENST00000442830 CENPFP49454 3210 aa17.18■□□□□ 0.34
PTPRE-203ENST00000442830 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 TLR2O60603 784 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 CACNB3P54284 484 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 ATG9AQ7Z3C6 839 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 CDAN1Q8IWY9 1227 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 TRMT2AQ8IZ69 625 aaKnown RBP17.17■□□□□ 0.34
PTPRE-203ENST00000442830 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
PTPRE-203ENST00000442830 SLC9C1Q4G0N8 1177 aa17.16■□□□□ 0.34
PTPRE-203ENST00000442830 FAM43AQ8N2R8 423 aa17.16■□□□□ 0.34
PTPRE-203ENST00000442830 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
PTPRE-203ENST00000442830 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
PTPRE-203ENST00000442830 IRF6O14896 467 aa17.15■□□□□ 0.34
PTPRE-203ENST00000442830 NOL9Q5SY16 702 aaKnown RBP17.15■□□□□ 0.34
PTPRE-203ENST00000442830 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
PTPRE-203ENST00000442830 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
PTPRE-203ENST00000442830 ZNF112Q9UJU3 913 aa17.15■□□□□ 0.34
PTPRE-203ENST00000442830 GNAI3P08754 354 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 SPTY2D1Q68D10 685 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-203ENST00000442830 ANKRD23Q86SG2 305 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
PTPRE-203ENST00000442830 ZNF333Q96JL9 665 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 SIL1Q9H173 461 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 COPRSQ9NQ92 184 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
PTPRE-203ENST00000442830 BTBD19C9JJ37 291 aa17.13■□□□□ 0.33
PTPRE-203ENST00000442830 HOXD10P28358 340 aa17.13■□□□□ 0.33
PTPRE-203ENST00000442830 PRDX5P30044 214 aa17.13■□□□□ 0.33
PTPRE-203ENST00000442830 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
PTPRE-203ENST00000442830 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
PTPRE-203ENST00000442830 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
PTPRE-203ENST00000442830 KCNH4Q9UQ05 1017 aa17.13■□□□□ 0.33
PTPRE-203ENST00000442830 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
PTPRE-203ENST00000442830 ENTPD3O75355 529 aa17.12■□□□□ 0.33
PTPRE-203ENST00000442830 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
PTPRE-203ENST00000442830 LRRFIP2Q9Y608 721 aaKnown RBP17.12■□□□□ 0.33
PTPRE-203ENST00000442830 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 IPO8O15397 1037 aaKnown RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 MVPQ14764 893 aaKnown RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 DIXDC1Q155Q3 683 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 PARK7Q99497 189 aaKnown RBP17.11■□□□□ 0.33
PTPRE-203ENST00000442830 IDI2Q9BXS1 227 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 USP40Q9NVE5 1235 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 PTCH2Q9Y6C5 1203 aa17.11■□□□□ 0.33
PTPRE-203ENST00000442830 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 CXCL11O14625 94 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 INPP5BP32019 993 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 PHKA1P46020 1223 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 TCP10Q12799 353 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 CCDC102BQ68D86 513 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
PTPRE-203ENST00000442830 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
PTPRE-203ENST00000442830 PICK1Q9NRD5 415 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 GAKO14976 1311 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 BRCA2P51587 3418 aa17.1■□□□□ 0.33
PTPRE-203ENST00000442830 MTX1Q13505 466 aa17.09■□□□□ 0.33
PTPRE-203ENST00000442830 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
PTPRE-203ENST00000442830 FASTKD5Q7L8L6 764 aaKnown RBP17.09■□□□□ 0.33
PTPRE-203ENST00000442830 FAM198AQ9UFP1 575 aa17.09■□□□□ 0.33
PTPRE-203ENST00000442830 DOCK1Q14185 1865 aa17.09■□□□□ 0.33
PTPRE-203ENST00000442830 MGAMO43451 1857 aa17.08■□□□□ 0.33
PTPRE-203ENST00000442830 PDHXO00330 501 aa17.08■□□□□ 0.32
PTPRE-203ENST00000442830 RARSP54136 660 aaKnown RBP17.08■□□□□ 0.32
PTPRE-203ENST00000442830 NFIAQ12857 509 aa17.08■□□□□ 0.32
PTPRE-203ENST00000442830 SLC45A1Q9Y2W3 748 aa17.08■□□□□ 0.32
PTPRE-203ENST00000442830 PTPRFP10586 1907 aa17.08■□□□□ 0.32
PTPRE-203ENST00000442830 SRGAP3O43295 1099 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
PTPRE-203ENST00000442830 CAPN2P17655 700 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 GSTO1P78417 241 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 ZSCAN29Q8IWY8 852 aaPredicted RBP17.07■□□□□ 0.32
PTPRE-203ENST00000442830 SCYL3Q8IZE3 742 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 MEIS3Q99687 375 aa17.07■□□□□ 0.32
PTPRE-203ENST00000442830 RFX7Q2KHR2 1363 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 LDHCP07864 332 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms