RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 PATL2C9JE40 543 aaKnown RBP25.23■■□□□ 1.63
VPS13B-204ENST00000441350 RPS12P25398 132 aaKnown RBP25.23■■□□□ 1.63
VPS13B-204ENST00000441350 BTDP43251 543 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 ZDHHC15Q96MV8 337 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 NOL10Q9BSC4 688 aaKnown RBP25.23■■□□□ 1.63
VPS13B-204ENST00000441350 RBM8AQ9Y5S9 174 aaKnown RBP25.23■■□□□ 1.63
VPS13B-204ENST00000441350 GSG1L2A8MUP6 293 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 PRKAB2O43741 272 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 HSPA4P34932 840 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 NECTIN1Q15223 517 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 SLC4A4Q9Y6R1 1079 aa25.23■■□□□ 1.63
VPS13B-204ENST00000441350 U3KPZ7 1027 aaPredicted RBP25.23■■□□□ 1.63
VPS13B-204ENST00000441350 RPAP1Q9BWH6 1393 aaPredicted RBP25.22■■□□□ 1.63
VPS13B-204ENST00000441350 USP17L8P0C7I0 530 aa25.22■■□□□ 1.63
VPS13B-204ENST00000441350 APOBEC3HQ6NTF7 200 aaKnown RBP25.22■■□□□ 1.63
VPS13B-204ENST00000441350 RHBDL3P58872 404 aa25.21■■□□□ 1.63
VPS13B-204ENST00000441350 ALX1Q15699 326 aa25.21■■□□□ 1.63
VPS13B-204ENST00000441350 CRNKL1Q9BZJ0 848 aaKnown RBP25.21■■□□□ 1.63
VPS13B-204ENST00000441350 FGAP02671 866 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 PLCG2P16885 1265 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 MMP14P50281 582 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 OGFOD1Q8N543 542 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 SH3RF3Q8TEJ3 882 aaPredicted RBP25.2■■□□□ 1.62
VPS13B-204ENST00000441350 DPF2Q92785 391 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 EPB41L4AQ9HCS5 686 aaPredicted RBP25.2■■□□□ 1.62
VPS13B-204ENST00000441350 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 GJA3Q9Y6H8 435 aa25.2■■□□□ 1.62
VPS13B-204ENST00000441350 ZMYM6O95789 1325 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 MCCP23508 829 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 GPC2Q8N158 579 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 KCNB2Q92953 911 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 CDK5RAP2Q96SN8 1893 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 APPP05067 770 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 GMPSP49915 693 aaPredicted RBP25.19■■□□□ 1.62
VPS13B-204ENST00000441350 IFNL3Q8IZI9 196 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 SDR42E1Q8WUS8 393 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 PCDHAC2Q9Y5I4 1007 aa25.19■■□□□ 1.62
VPS13B-204ENST00000441350 ZNF280AP59817 542 aaPredicted RBP25.18■■□□□ 1.62
VPS13B-204ENST00000441350 CFAP100Q494V2 611 aa25.18■■□□□ 1.62
VPS13B-204ENST00000441350 GIMAP6Q6P9H5 292 aa25.18■■□□□ 1.62
VPS13B-204ENST00000441350 CTNNA3Q9UI47 895 aa25.18■■□□□ 1.62
VPS13B-204ENST00000441350 PALD1Q9ULE6 856 aa25.18■■□□□ 1.62
VPS13B-204ENST00000441350 RBM5P52756 815 aaKnown RBP eCLIP25.17■■□□□ 1.62
VPS13B-204ENST00000441350 CREB3L3Q68CJ9 461 aa25.17■■□□□ 1.62
VPS13B-204ENST00000441350 MTMR14Q8NCE2 650 aa25.17■■□□□ 1.62
VPS13B-204ENST00000441350 IL17RAQ96F46 866 aa25.17■■□□□ 1.62
VPS13B-204ENST00000441350 NACAP1Q9BZK3 213 aa25.17■■□□□ 1.62
VPS13B-204ENST00000441350 ATP8A2Q9NTI2 1148 aa25.17■■□□□ 1.62
VPS13B-204ENST00000441350 SLC27A2O14975 620 aa25.16■■□□□ 1.62
VPS13B-204ENST00000441350 CDC42EP5Q6NZY7 148 aa25.16■■□□□ 1.62
VPS13B-204ENST00000441350 KIF2CQ99661 725 aa25.16■■□□□ 1.62
VPS13B-204ENST00000441350 MKRN1Q9UHC7 482 aaKnown RBP25.16■■□□□ 1.62
VPS13B-204ENST00000441350 ZC3H4Q9UPT8 1303 aaKnown RBP25.16■■□□□ 1.62
VPS13B-204ENST00000441350 ECM29Q5VYK3 1845 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 ANAPC15P60006 121 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 TEX11Q8IYF3 940 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 RASEFQ8IZ41 740 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 DCP1AQ9NPI6 582 aaPredicted RBP25.15■■□□□ 1.62
VPS13B-204ENST00000441350 USP40Q9NVE5 1235 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 FOCADQ5VW36 1801 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 SHTN1A0MZ66 631 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 SPDYE2BA6NHP3 402 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 SPDYE6P0CI01 402 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 RNF20Q5VTR2 975 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 ZBED3Q96IU2 234 aaPredicted RBP25.15■■□□□ 1.62
VPS13B-204ENST00000441350 PRMT6Q96LA8 375 aaPredicted RBP25.15■■□□□ 1.62
VPS13B-204ENST00000441350 NAPBQ9H115 298 aa25.15■■□□□ 1.62
VPS13B-204ENST00000441350 CYP21A2P08686 494 aa25.14■■□□□ 1.61
VPS13B-204ENST00000441350 DLGAP5Q15398 846 aa25.14■■□□□ 1.61
VPS13B-204ENST00000441350 TGFBRAP1Q8WUH2 860 aa25.14■■□□□ 1.61
VPS13B-204ENST00000441350 CNOT7Q9UIV1 285 aaKnown RBP25.14■■□□□ 1.61
VPS13B-204ENST00000441350 SNX14Q9Y5W7 946 aa25.14■■□□□ 1.61
VPS13B-204ENST00000441350 BAZ2AQ9UIF9 1905 aaKnown RBP25.13■■□□□ 1.61
VPS13B-204ENST00000441350 WDHD1O75717 1129 aaPredicted RBP25.13■■□□□ 1.61
VPS13B-204ENST00000441350 TSGA10IPQ3SY00 556 aa25.13■■□□□ 1.61
VPS13B-204ENST00000441350 MICALL2Q8IY33 904 aa25.13■■□□□ 1.61
VPS13B-204ENST00000441350 LAMA4Q16363 1823 aa25.13■■□□□ 1.61
VPS13B-204ENST00000441350 USP5P45974 858 aa25.12■■□□□ 1.61
VPS13B-204ENST00000441350 TDO2P48775 406 aa25.12■■□□□ 1.61
VPS13B-204ENST00000441350 MYOZ2Q9NPC6 264 aa25.12■■□□□ 1.61
VPS13B-204ENST00000441350 RBM19Q9Y4C8 960 aaKnown RBP25.12■■□□□ 1.61
VPS13B-204ENST00000441350 DDNO94850 711 aaPredicted RBP25.12■■□□□ 1.61
VPS13B-204ENST00000441350 ZKSCAN1P17029 563 aaPredicted RBP25.12■■□□□ 1.61
VPS13B-204ENST00000441350 IMMTQ16891 758 aaKnown RBP25.12■■□□□ 1.61
VPS13B-204ENST00000441350 GPRC5DQ9NZD1 345 aa25.12■■□□□ 1.61
VPS13B-204ENST00000441350 TAF6LQ9Y6J9 622 aa25.12■■□□□ 1.61
VPS13B-204ENST00000441350 NAV1Q8NEY1 1877 aa25.11■■□□□ 1.61
VPS13B-204ENST00000441350 DDRGK1Q96HY6 314 aa25.11■■□□□ 1.61
VPS13B-204ENST00000441350 FLT1P17948 1338 aa25.1■■□□□ 1.61
VPS13B-204ENST00000441350 ZNF213O14771 459 aa25.1■■□□□ 1.61
VPS13B-204ENST00000441350 CTR9Q6PD62 1173 aa25.1■■□□□ 1.61
VPS13B-204ENST00000441350 MAPKAPK5Q8IW41 473 aa25.1■■□□□ 1.61
VPS13B-204ENST00000441350 TDRD3Q9H7E2 651 aaKnown RBP25.1■■□□□ 1.61
VPS13B-204ENST00000441350 DDX60LQ5H9U9 1706 aaKnown RBP25.1■■□□□ 1.61
VPS13B-204ENST00000441350 SBK1Q52WX2 424 aa25.09■■□□□ 1.61
VPS13B-204ENST00000441350 IDI2Q9BXS1 227 aa25.09■■□□□ 1.61
VPS13B-204ENST00000441350 NBPF3Q9H094 633 aa25.09■■□□□ 1.61
VPS13B-204ENST00000441350 USP17L12C9JPN9 530 aa25.08■■□□□ 1.61
VPS13B-204ENST00000441350 USP17L21D6R901 530 aa25.08■■□□□ 1.61
VPS13B-204ENST00000441350 WNT10BO00744 389 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms