RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 COL13A1Q5TAT6 717 aaPredicted RBP29.47■■■□□ 2.31
CPNE1-217ENST00000439669 FKBP1CQ5VVH2 108 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 CDC42EP5Q6NZY7 148 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 TBC1D9Q6ZT07 1266 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 AACSQ86V21 672 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 SNRKQ9NRH2 765 aa29.47■■■□□ 2.31
CPNE1-217ENST00000439669 HSPA8P11142 646 aaKnown RBP29.46■■■□□ 2.31
CPNE1-217ENST00000439669 IREB2P48200 963 aaKnown RBP29.46■■■□□ 2.31
CPNE1-217ENST00000439669 LBX1P52954 281 aa29.46■■■□□ 2.31
CPNE1-217ENST00000439669 MAP3K11Q16584 847 aa29.46■■■□□ 2.31
CPNE1-217ENST00000439669 FAM83AQ86UY5 434 aa29.46■■■□□ 2.31
CPNE1-217ENST00000439669 RHPN1Q8TCX5 695 aa29.46■■■□□ 2.31
CPNE1-217ENST00000439669 IL1RAPL2Q9NP60 686 aa29.46■■■□□ 2.31
CPNE1-217ENST00000439669 MYH2Q9UKX2 1941 aa29.45■■■□□ 2.31
CPNE1-217ENST00000439669 RRP1P56182 461 aaKnown RBP29.45■■■□□ 2.31
CPNE1-217ENST00000439669 MECOMQ03112 1051 aa29.45■■■□□ 2.31
CPNE1-217ENST00000439669 USP40Q9NVE5 1235 aa29.45■■■□□ 2.31
CPNE1-217ENST00000439669 RAI14Q9P0K7 980 aa29.45■■■□□ 2.31
CPNE1-217ENST00000439669 GAKO14976 1311 aa29.45■■■□□ 2.3
CPNE1-217ENST00000439669 MKRN3Q13064 507 aaKnown RBP29.44■■■□□ 2.3
CPNE1-217ENST00000439669 KIF1BPQ96EK5 621 aa29.44■■■□□ 2.3
CPNE1-217ENST00000439669 LRP2BPQ9P2M1 347 aa29.44■■■□□ 2.3
CPNE1-217ENST00000439669 TSKSQ9UJT2 592 aa29.44■■■□□ 2.3
CPNE1-217ENST00000439669 CA12O43570 354 aa29.43■■■□□ 2.3
CPNE1-217ENST00000439669 USP2O75604 605 aaPredicted RBP29.43■■■□□ 2.3
CPNE1-217ENST00000439669 ZNF512BQ96KM6 892 aaPredicted RBP29.43■■■□□ 2.3
CPNE1-217ENST00000439669 BCL11AQ9H165 835 aa29.43■■■□□ 2.3
CPNE1-217ENST00000439669 MROH7-TTC4A0A0A0MT08 1334 aa29.43■■■□□ 2.3
CPNE1-217ENST00000439669 GSTO1P78417 241 aa29.42■■■□□ 2.3
CPNE1-217ENST00000439669 TCP10Q12799 353 aa29.42■■■□□ 2.3
CPNE1-217ENST00000439669 SLC10A4Q96EP9 437 aa29.42■■■□□ 2.3
CPNE1-217ENST00000439669 CLMNQ96JQ2 1002 aa29.42■■■□□ 2.3
CPNE1-217ENST00000439669 PRDM10Q9NQV6 1147 aa29.42■■■□□ 2.3
CPNE1-217ENST00000439669 RPAP1Q9BWH6 1393 aaPredicted RBP29.41■■■□□ 2.3
CPNE1-217ENST00000439669 BTDP43251 543 aa29.41■■■□□ 2.3
CPNE1-217ENST00000439669 NFIAQ12857 509 aa29.41■■■□□ 2.3
CPNE1-217ENST00000439669 CLASRPQ8N2M8 674 aaKnown RBP29.41■■■□□ 2.3
CPNE1-217ENST00000439669 CSRNP1Q96S65 589 aa29.41■■■□□ 2.3
CPNE1-217ENST00000439669 RAB11FIP3O75154 756 aa29.4■■■□□ 2.3
CPNE1-217ENST00000439669 ANKRD13AQ8IZ07 590 aa29.4■■■□□ 2.3
CPNE1-217ENST00000439669 FAM151AQ8WW52 585 aa29.4■■■□□ 2.3
CPNE1-217ENST00000439669 NSUN4Q96CB9 384 aaKnown RBP29.4■■■□□ 2.3
CPNE1-217ENST00000439669 HOOK2Q96ED9 719 aa29.4■■■□□ 2.3
CPNE1-217ENST00000439669 FAM163AQ96GL9 167 aaPredicted RBP29.4■■■□□ 2.3
CPNE1-217ENST00000439669 LDHCP07864 332 aa29.39■■■□□ 2.3
CPNE1-217ENST00000439669 ZAP70P43403 619 aa29.39■■■□□ 2.3
CPNE1-217ENST00000439669 REM2Q8IYK8 340 aaPredicted RBP29.39■■■□□ 2.3
CPNE1-217ENST00000439669 ZNF384Q8TF68 577 aa29.39■■■□□ 2.3
CPNE1-217ENST00000439669 AKAP11Q9UKA4 1901 aa29.38■■■□□ 2.29
CPNE1-217ENST00000439669 UNCXA6NJT0 531 aa29.38■■■□□ 2.29
CPNE1-217ENST00000439669 SPRYD7Q5W111 196 aa29.38■■■□□ 2.29
CPNE1-217ENST00000439669 CYP2E1P05181 493 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-217ENST00000439669 FAM198AQ9UFP1 575 aa29.37■■■□□ 2.29
CPNE1-217ENST00000439669 OTOFQ9HC10 1997 aa29.36■■■□□ 2.29
CPNE1-217ENST00000439669 GPR75-ASB3A0A0A6YYF3 556 aa29.36■■■□□ 2.29
CPNE1-217ENST00000439669 IFIT2P09913 472 aaKnown RBP29.36■■■□□ 2.29
CPNE1-217ENST00000439669 DCAF15Q66K64 600 aa29.36■■■□□ 2.29
CPNE1-217ENST00000439669 WNK4Q96J92 1243 aa29.36■■■□□ 2.29
CPNE1-217ENST00000439669 MAST2Q6P0Q8 1798 aa29.35■■■□□ 2.29
CPNE1-217ENST00000439669 RGS3P49796 1198 aa29.35■■■□□ 2.29
CPNE1-217ENST00000439669 NAA16Q6N069 864 aaPredicted RBP29.35■■■□□ 2.29
CPNE1-217ENST00000439669 TNS4Q8IZW8 715 aa29.35■■■□□ 2.29
CPNE1-217ENST00000439669 ELP3Q9H9T3 547 aa29.35■■■□□ 2.29
CPNE1-217ENST00000439669 RNF186Q9NXI6 227 aa29.35■■■□□ 2.29
CPNE1-217ENST00000439669 TRPA1O75762 1119 aa29.34■■■□□ 2.29
CPNE1-217ENST00000439669 MAP3K9P80192 1104 aa29.34■■■□□ 2.29
CPNE1-217ENST00000439669 IDI2Q9BXS1 227 aa29.34■■■□□ 2.29
CPNE1-217ENST00000439669 PIH1D3Q9NQM4 214 aaKnown RBP29.34■■■□□ 2.29
CPNE1-217ENST00000439669 SAGE1Q9NXZ1 904 aa29.34■■■□□ 2.29
CPNE1-217ENST00000439669 CSADQ9Y600 493 aa29.34■■■□□ 2.29
CPNE1-217ENST00000439669 ENTPD3O75355 529 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 SREBF2Q12772 1141 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 PICALMQ13492 652 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 MIGA2Q7L4E1 593 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.33■■■□□ 2.298e-6■■□□□ 11.7
CPNE1-217ENST00000439669 WRNIP1Q96S55 665 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 NOL10Q9BSC4 688 aaKnown RBP29.33■■■□□ 2.29
CPNE1-217ENST00000439669 RFX7Q2KHR2 1363 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 AK9Q5TCS8 1911 aa29.33■■■□□ 2.29
CPNE1-217ENST00000439669 WDHD1O75717 1129 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-217ENST00000439669 ZBTB48P10074 688 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-217ENST00000439669 VGLL4Q14135 290 aa29.32■■■□□ 2.28
CPNE1-217ENST00000439669 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-217ENST00000439669 ZSCAN29Q8IWY8 852 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-217ENST00000439669 ZFPM1Q8IX07 1006 aa29.32■■■□□ 2.28
CPNE1-217ENST00000439669 ZNF341Q9BYN7 854 aa29.32■■■□□ 2.28
CPNE1-217ENST00000439669 NDUFB9Q9Y6M9 179 aa29.32■■■□□ 2.28
CPNE1-217ENST00000439669 IDH1O75874 414 aaKnown RBP29.31■■■□□ 2.28
CPNE1-217ENST00000439669 RHBDL3P58872 404 aa29.31■■■□□ 2.28
CPNE1-217ENST00000439669 LRRCC1Q9C099 1032 aa29.31■■■□□ 2.28
CPNE1-217ENST00000439669 MANSC4A6NHS7 340 aaPredicted RBP29.3■■■□□ 2.28
CPNE1-217ENST00000439669 OPTNQ96CV9 577 aa29.3■■■□□ 2.28
CPNE1-217ENST00000439669 CRBNQ96SW2 442 aa29.3■■■□□ 2.28
CPNE1-217ENST00000439669 DDX4Q9NQI0 724 aaKnown RBP29.3■■■□□ 2.28
CPNE1-217ENST00000439669 TM4SF4P48230 202 aa29.29■■■□□ 2.28
CPNE1-217ENST00000439669 MYO5AQ9Y4I1 1855 aaKnown RBP29.28■■■□□ 2.28
CPNE1-217ENST00000439669 IGSF3O75054 1194 aa29.28■■■□□ 2.28
CPNE1-217ENST00000439669 BAG3O95817 575 aa29.28■■■□□ 2.28
CPNE1-217ENST00000439669 MAP4K4O95819 1239 aaPredicted RBP29.28■■■□□ 2.28
CPNE1-217ENST00000439669 GJA5P36382 358 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms