RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 GPBP1L1Q9HC44 474 aaPredicted RBP16.21■□□□□ 0.19
EXT1-203ENST00000437196 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.19
EXT1-203ENST00000437196 WNT10BO00744 389 aa16.2■□□□□ 0.18
EXT1-203ENST00000437196 GNAT2P19087 354 aa16.2■□□□□ 0.18
EXT1-203ENST00000437196 MCMDC2Q4G0Z9 681 aa16.2■□□□□ 0.18
EXT1-203ENST00000437196 APOBEC3HQ6NTF7 200 aaKnown RBP16.2■□□□□ 0.18
EXT1-203ENST00000437196 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
EXT1-203ENST00000437196 AATFQ9NY61 560 aaKnown RBP eCLIP16.2■□□□□ 0.18
EXT1-203ENST00000437196 RAD50Q92878 1312 aa16.2■□□□□ 0.18
EXT1-203ENST00000437196 CHMLP26374 656 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 TNFAIP1Q13829 316 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 ZBED3Q96IU2 234 aaPredicted RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 PRMT6Q96LA8 375 aaPredicted RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 USP40Q9NVE5 1235 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 POTECB2RU33 542 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 NMIQ13287 307 aaPredicted RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 FKBP1CQ5VVH2 108 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 CWC27Q6UX04 472 aaKnown RBP16.19■□□□□ 0.18
EXT1-203ENST00000437196 ADGRA1Q86SQ6 560 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 MIGA1Q8NAN2 632 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 OSBP2Q969R2 916 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
EXT1-203ENST00000437196 PITPNM2Q9BZ72 1349 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 MBD4O95243 580 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 TNNI2P48788 182 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 SPDYE2Q495Y8 402 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
EXT1-203ENST00000437196 CDC42EP5Q6NZY7 148 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 APOBEC3FQ8IUX4 373 aaKnown RBP16.18■□□□□ 0.18
EXT1-203ENST00000437196 TEX11Q8IYF3 940 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 TRPM4Q8TD43 1214 aa16.18■□□□□ 0.18
EXT1-203ENST00000437196 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
EXT1-203ENST00000437196 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
EXT1-203ENST00000437196 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
EXT1-203ENST00000437196 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
EXT1-203ENST00000437196 GPAA1O43292 621 aa16.17■□□□□ 0.18
EXT1-203ENST00000437196 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
EXT1-203ENST00000437196 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
EXT1-203ENST00000437196 FAM227BQ96M60 508 aa16.17■□□□□ 0.18
EXT1-203ENST00000437196 IDI2Q9BXS1 227 aa16.17■□□□□ 0.18
EXT1-203ENST00000437196 NMRK2Q9NPI5 230 aa16.17■□□□□ 0.18
EXT1-203ENST00000437196 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
EXT1-203ENST00000437196 ADAMTSL1Q8N6G6 1762 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 A0A0D9SFI3 127 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 EGFRP00533 1210 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 USP5P45974 858 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 RHBDL3P58872 404 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 LDHDQ86WU2 507 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
EXT1-203ENST00000437196 STRBPQ96SI9 672 aaKnown RBP16.16■□□□□ 0.18
EXT1-203ENST00000437196 NACAP1Q9BZK3 213 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 VEZTQ9HBM0 779 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
EXT1-203ENST00000437196 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
EXT1-203ENST00000437196 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
EXT1-203ENST00000437196 SLFNL1Q499Z3 407 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 GIMAP6Q6P9H5 292 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 KIAA1211Q6ZU35 1233 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 FAM83AQ86UY5 434 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 ARMT1Q9H993 441 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 PGAP2Q9UHJ9 254 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 PCDHAC2Q9Y5I4 1007 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
EXT1-203ENST00000437196 CLRN2A0PK11 232 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 M0R2C6 588 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 ENTPD3O75355 529 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 CHGBP05060 677 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
EXT1-203ENST00000437196 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
EXT1-203ENST00000437196 PPP2R3BQ9Y5P8 575 aa16.14■□□□□ 0.17
EXT1-203ENST00000437196 FOCADQ5VW36 1801 aa16.13■□□□□ 0.17
EXT1-203ENST00000437196 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
EXT1-203ENST00000437196 SGSM2O43147 1006 aa16.13■□□□□ 0.17
EXT1-203ENST00000437196 TGFBRAP1Q8WUH2 860 aa16.13■□□□□ 0.17
EXT1-203ENST00000437196 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
EXT1-203ENST00000437196 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
EXT1-203ENST00000437196 WDHD1O75717 1129 aaPredicted RBP16.12■□□□□ 0.17
EXT1-203ENST00000437196 APPP05067 770 aa16.12■□□□□ 0.17
EXT1-203ENST00000437196 CDC37L1Q7L3B6 337 aa16.12■□□□□ 0.17
EXT1-203ENST00000437196 FAM151AQ8WW52 585 aa16.12■□□□□ 0.17
EXT1-203ENST00000437196 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
EXT1-203ENST00000437196 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
EXT1-203ENST00000437196 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
EXT1-203ENST00000437196 TCP10L2B9ZVM9 353 aa16.11■□□□□ 0.17
EXT1-203ENST00000437196 REC8O95072 547 aa16.11■□□□□ 0.17
EXT1-203ENST00000437196 PICALMQ13492 652 aa16.11■□□□□ 0.17
EXT1-203ENST00000437196 ZNF784Q8NCA9 323 aaPredicted RBP16.11■□□□□ 0.17
EXT1-203ENST00000437196 DSCC1Q9BVC3 393 aa16.11■□□□□ 0.17
EXT1-203ENST00000437196 FLT1P17948 1338 aa16.11■□□□□ 0.17
EXT1-203ENST00000437196 HSPD1P10809 573 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms