RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 CUL4AQ13619 759 aa12.25□□□□□ -0.45
NOD1-206ENST00000434755 NBPF10Q6P3W6 841 aaKnown RBP12.25□□□□□ -0.45
NOD1-206ENST00000434755 NIM1KQ8IY84 436 aa12.25□□□□□ -0.45
NOD1-206ENST00000434755 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
NOD1-206ENST00000434755 MCM9Q9NXL9 1143 aa12.25□□□□□ -0.45
NOD1-206ENST00000434755 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
NOD1-206ENST00000434755 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 BRD1O95696 1058 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 UBE3CQ15386 1083 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 SUSD4Q5VX71 490 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 ISM2Q6H9L7 571 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 FAM177A1Q8N128 213 aaPredicted RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 BIN1O00499 593 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 NF2P35240 595 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 LSG1Q9H089 658 aaKnown RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 ZBTB43O43298 467 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
NOD1-206ENST00000434755 LARGE2Q8N3Y3 721 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 MASTLQ96GX5 879 aa12.24□□□□□ -0.45
NOD1-206ENST00000434755 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 ANTXR1Q9H6X2 564 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 UTYO14607 1347 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 NEMFO60524 1076 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 ERFEQ4G0M1 354 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 ZKSCAN3Q9BRR0 538 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 PRC1O43663 620 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 SYT1P21579 422 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 CCDC102BQ68D86 513 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 BCL9O00512 1426 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 RPAP1Q9BWH6 1393 aaPredicted RBP12.23□□□□□ -0.45
NOD1-206ENST00000434755 ZNF445P59923 1031 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 ZNF34Q8IZ26 560 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
NOD1-206ENST00000434755 KCNQ2O43526 872 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 MBD4O95243 580 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 COL14A1Q05707 1796 aaKnown RBP12.22□□□□□ -0.45
NOD1-206ENST00000434755 TEX11Q8IYF3 940 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 FAM227BQ96M60 508 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 GRM1Q13255 1194 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 STIM1Q13586 685 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 MAP7D2Q96T17 732 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 PRDM1O75626 825 aa12.22□□□□□ -0.45
NOD1-206ENST00000434755 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 GPAA1O43292 621 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 HLFQ16534 295 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 STX1AQ16623 288 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 FSIP1Q8NA03 581 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 CCDC148Q8NFR7 591 aa12.21□□□□□ -0.45
NOD1-206ENST00000434755 ZNF274Q96GC6 653 aaPredicted RBP12.21□□□□□ -0.45
NOD1-206ENST00000434755 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.46
NOD1-206ENST00000434755 ZAP70P43403 619 aa12.21□□□□□ -0.46
NOD1-206ENST00000434755 SF3B3Q15393 1217 aaKnown RBP12.21□□□□□ -0.46
NOD1-206ENST00000434755 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.46
NOD1-206ENST00000434755 FAM208AQ9UK61 1670 aaKnown RBP12.21□□□□□ -0.46
NOD1-206ENST00000434755 MMP10P09238 476 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 APOBRQ0VD83 1088 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 LRRC24Q50LG9 513 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 CUL5Q93034 780 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
NOD1-206ENST00000434755 PPIP5K2O43314 1243 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 IDEP14735 1019 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 RBM28Q9NW13 759 aaKnown RBP12.2□□□□□ -0.46
NOD1-206ENST00000434755 KIF2AO00139 706 aaPredicted RBP12.2□□□□□ -0.46
NOD1-206ENST00000434755 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 TNFAIP1Q13829 316 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 MNS1Q8NEH6 495 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 GOLGA6L1Q8N7Z2 621 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
NOD1-206ENST00000434755 SRP68Q9UHB9 627 aaKnown RBP12.2□□□□□ -0.46
NOD1-206ENST00000434755 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
NOD1-206ENST00000434755 PDCL3Q9H2J4 239 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 PHLPP1O60346 1717 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 TNIP1Q15025 636 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 COA1Q9GZY4 146 aa12.19□□□□□ -0.46
NOD1-206ENST00000434755 PATL2C9JE40 543 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms