RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 ZBTB40Q9NUA8 1239 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 MKRN1Q9UHC7 482 aaKnown RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 PGAP2Q9UHJ9 254 aa7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 TTF2Q9UNY4 1162 aaKnown RBP7.12□□□□□ -1.27
HMGB3P24-201ENST00000433260 UTRNP46939 3433 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 FAM205AQ6ZU69 1335 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 PASKQ96RG2 1323 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 TMEM88BA6NKF7 163 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 WNT10BO00744 389 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 EVI5O60447 810 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CELF2O95319 508 aaKnown RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 GRM1Q13255 1194 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CFAP100Q494V2 611 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CST9Q5W186 159 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 KRT26Q7Z3Y9 468 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 SIRT2Q8IXJ6 389 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 ZNF710Q8N1W2 664 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 ZC3H15Q8WU90 426 aaKnown RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 PRMT6Q96LA8 375 aaPredicted RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 GNL3LQ9NVN8 582 aaKnown RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 GGA3Q9NZ52 723 aa7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 ABT1Q9ULW3 272 aaKnown RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 SUPT16HQ9Y5B9 1047 aaKnown RBP7.11□□□□□ -1.27
HMGB3P24-201ENST00000433260 CLRN2A0PK11 232 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 FKBP1AP62942 108 aaKnown RBP7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 IRX6P78412 446 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 PRKG1Q13976 671 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 DEFB115Q30KQ5 88 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 TNNI3KQ59H18 835 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 TBC1D9Q6ZT07 1266 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 SULF1Q8IWU6 871 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 DNAJC5GQ8N7S2 189 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 EAF2Q96CJ1 260 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 DBNDD2Q9BQY9 259 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 VEZTQ9HBM0 779 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 IL1RAPL2Q9NP60 686 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 SNRKQ9NRH2 765 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 ABCF2Q9UG63 623 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 DENND2AQ9ULE3 1009 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 NOP58Q9Y2X3 529 aaKnown RBP7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 FPGT-TNNI3KV9GXZ4 949 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 TRPM7Q96QT4 1865 aa7.1□□□□□ -1.27
HMGB3P24-201ENST00000433260 GOLGB1Q14789 3259 aaKnown RBP7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 AOX1Q06278 1338 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 MYO1BO43795 1136 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 HMMRO75330 724 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 CRKP46108 304 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 CCDC158Q5M9N0 1113 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 TTC39AQ5SRH9 613 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 PI16Q6UXB8 463 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 WDR66Q8TBY9 1149 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 TBC1D22AQ8WUA7 517 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 TDRD3Q9H7E2 651 aaKnown RBP7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 PCDHGA4Q9Y5G9 962 aa7.09□□□□□ -1.27
HMGB3P24-201ENST00000433260 GRXCR2A6NFK2 248 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 TCP10L2B9ZVM9 353 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 SMARCA5O60264 1052 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 LDHBP07195 334 aaKnown RBP7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 PRDX5P30044 214 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 CACNB3P54284 484 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 RASGRF1Q13972 1273 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 TTLL12Q14166 644 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 DIXDC1Q155Q3 683 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 HSP90AB4PQ58FF6 505 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 MOB2Q70IA6 237 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 AACSQ86V21 672 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 ERC1Q8IUD2 1116 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 SPATA5Q8NB90 893 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 TEKT1Q969V4 418 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 ZBED3Q96IU2 234 aaPredicted RBP7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 ZSWIM6Q9HCJ5 1215 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 TLR7Q9NYK1 1049 aaKnown RBP7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 HMG20BQ9P0W2 317 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 FZD1Q9UP38 647 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 PCDHB15Q9Y5E8 787 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
HMGB3P24-201ENST00000433260 ARAP2Q8WZ64 1704 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 MYO5AQ9Y4I1 1855 aaKnown RBP7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 ECM29Q5VYK3 1845 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 UQCRFS1P1P0C7P4 283 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 MLLT3P42568 568 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 MCAMP43121 646 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 VEGFBP49765 207 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 MMP14P50281 582 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 LHX8Q68G74 356 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 ERICH6Q7L0X2 663 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 MTMR14Q8NCE2 650 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 EXOC6Q8TAG9 804 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 KLRG1Q96E93 195 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 GBA2Q9HCG7 927 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 GPR108Q9NPR9 543 aa7.07□□□□□ -1.28
HMGB3P24-201ENST00000433260 RAI14Q9P0K7 980 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms