RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
ATG4B-210ENST00000428861 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-210ENST00000428861 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-210ENST00000428861 NF2P35240 595 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-210ENST00000428861 TNFAIP1Q13829 316 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 MAP3K11Q16584 847 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 HSP90AB4PQ58FF6 505 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
ATG4B-210ENST00000428861 KIF1BPQ96EK5 621 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-210ENST00000428861 CLMNQ96JQ2 1002 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 BCL11AQ9H165 835 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
ATG4B-210ENST00000428861 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
ATG4B-210ENST00000428861 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 BTDP43251 543 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 TCP10Q12799 353 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 NOGQ13253 232 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 SUPT20HL1Q3ZLR7 823 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 FKBP1CQ5VVH2 108 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-210ENST00000428861 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 CCDC102AQ96A19 550 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 RFX7Q2KHR2 1363 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
ATG4B-210ENST00000428861 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 TNNI2P48788 182 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 RHBDL3P58872 404 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 COL13A1Q5TAT6 717 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 ADGRA1Q86SQ6 560 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 CSRNP1Q96S65 589 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 DDX4Q9NQI0 724 aaKnown RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-210ENST00000428861 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
ATG4B-210ENST00000428861 PPP1R12BO60237 982 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-210ENST00000428861 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
ATG4B-210ENST00000428861 GJA5P36382 358 aa13.15□□□□□ -0.3
ATG4B-210ENST00000428861 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
ATG4B-210ENST00000428861 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.3
ATG4B-210ENST00000428861 FAM151AQ8WW52 585 aa13.15□□□□□ -0.3
ATG4B-210ENST00000428861 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
ATG4B-210ENST00000428861 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
ATG4B-210ENST00000428861 MYO5AQ9Y4I1 1855 aaKnown RBP13.14□□□□□ -0.31
ATG4B-210ENST00000428861 RGS3P49796 1198 aa13.14□□□□□ -0.31
ATG4B-210ENST00000428861 LBX1P52954 281 aa13.14□□□□□ -0.31
ATG4B-210ENST00000428861 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-210ENST00000428861 MIGA2Q7L4E1 593 aa13.14□□□□□ -0.31
ATG4B-210ENST00000428861 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
ATG4B-210ENST00000428861 IDI2Q9BXS1 227 aa13.14□□□□□ -0.31
ATG4B-210ENST00000428861 ATRNL1Q5VV63 1379 aa13.13□□□□□ -0.31
ATG4B-210ENST00000428861 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-210ENST00000428861 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
ATG4B-210ENST00000428861 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
ATG4B-210ENST00000428861 SPRYD7Q5W111 196 aa13.13□□□□□ -0.31
ATG4B-210ENST00000428861 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
ATG4B-210ENST00000428861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
ATG4B-210ENST00000428861 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
ATG4B-210ENST00000428861 EDC3Q96F86 508 aaKnown RBP13.13□□□□□ -0.31
ATG4B-210ENST00000428861 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
ATG4B-210ENST00000428861 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 DDTLA6NHG4 134 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 CTCFP49711 727 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 GSTO1P78417 241 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 PICALMQ13492 652 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 VGLL4Q14135 290 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 WNK4Q96J92 1243 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
ATG4B-210ENST00000428861 AATFQ9NY61 560 aaKnown RBP eCLIP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
ATG4B-210ENST00000428861 ENTPD3O75355 529 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 IDH1O75874 414 aaKnown RBP13.11□□□□□ -0.31
ATG4B-210ENST00000428861 CHGBP05060 677 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 LDHCP07864 332 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 DYNLL1P63167 89 aaKnown RBP13.11□□□□□ -0.31
ATG4B-210ENST00000428861 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 SLFNL1Q499Z3 407 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.11□□□□□ -0.31
ATG4B-210ENST00000428861 ZKSCAN4Q969J2 545 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-210ENST00000428861 BOLA2Q9H3K6 86 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 SNCAIPQ9Y6H5 919 aa13.11□□□□□ -0.31
ATG4B-210ENST00000428861 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
ATG4B-210ENST00000428861 GOLIM4O00461 696 aa13.1□□□□□ -0.31
ATG4B-210ENST00000428861 CYP7A1P22680 504 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms