RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 MTMR6Q9Y217 621 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 JAG2Q9Y219 1238 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 CNPY2Q9Y2B0 182 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
TVP23C-203ENST00000428082 DOCK2Q92608 1830 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 MYH7P12883 1935 aa18.5■□□□□ 0.55
TVP23C-203ENST00000428082 CHGBP05060 677 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
TVP23C-203ENST00000428082 ME3Q16798 604 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 COA1Q9GZY4 146 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 ZBTB22O15209 634 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 LARGE1O95461 756 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 TTF1Q15361 905 aaPredicted RBP18.49■□□□□ 0.55
TVP23C-203ENST00000428082 FOXD4L6Q3SYB3 417 aaPredicted RBP18.49■□□□□ 0.55
TVP23C-203ENST00000428082 FOXD4L3Q6VB84 417 aaPredicted RBP18.49■□□□□ 0.55
TVP23C-203ENST00000428082 DBNDD1Q9H9R9 158 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
TVP23C-203ENST00000428082 ZNF277Q9NRM2 450 aaPredicted RBP18.48■□□□□ 0.55
TVP23C-203ENST00000428082 PDS5AQ29RF7 1337 aaKnown RBP18.48■□□□□ 0.55
TVP23C-203ENST00000428082 PPIP5K2O43314 1243 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 LARP1BQ659C4 914 aaKnown RBP18.47■□□□□ 0.55
TVP23C-203ENST00000428082 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
TVP23C-203ENST00000428082 TPCN1Q9ULQ1 816 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 G3V3G9 751 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 NFKBIEO00221 500 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 IDH1O75874 414 aaKnown RBP18.47■□□□□ 0.55
TVP23C-203ENST00000428082 SLFNL1Q499Z3 407 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
TVP23C-203ENST00000428082 ABCF2Q9UG63 623 aa18.47■□□□□ 0.55
TVP23C-203ENST00000428082 ZNF500O60304 480 aaPredicted RBP18.46■□□□□ 0.55
TVP23C-203ENST00000428082 KRT85P78386 507 aa18.46■□□□□ 0.55
TVP23C-203ENST00000428082 MCMDC2Q4G0Z9 681 aa18.46■□□□□ 0.55
TVP23C-203ENST00000428082 TAOK3Q9H2K8 898 aa18.46■□□□□ 0.55
TVP23C-203ENST00000428082 SCN9AQ15858 1988 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 VPS37CA5D8V6 355 aaPredicted RBP18.45■□□□□ 0.54
TVP23C-203ENST00000428082 FIBPO43427 364 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 ECE2O60344 883 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 COL4A5P29400 1685 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 UTRNP46939 3433 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 HMGB1P09429 215 aaKnown RBP18.45■□□□□ 0.54
TVP23C-203ENST00000428082 PODNQ7Z5L7 613 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 KCNQ5Q9NR82 932 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 LRP2BPQ9P2M1 347 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
TVP23C-203ENST00000428082 ELP1O95163 1332 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 RNF113AO15541 343 aaKnown RBP18.44■□□□□ 0.54
TVP23C-203ENST00000428082 TPM2P07951 284 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 GTF2IP78347 998 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 RNF214Q8ND24 703 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 WDR66Q8TBY9 1149 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 CHMP4CQ96CF2 233 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 NEK1Q96PY6 1258 aa18.44■□□□□ 0.54
TVP23C-203ENST00000428082 OFD1O75665 1012 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 TERF1P54274 439 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 RASSF7Q02833 373 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 ST3GAL1Q11201 340 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 SLC9C2Q5TAH2 1124 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 ZNF589Q86UQ0 364 aaPredicted RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■■□ 21.2
TVP23C-203ENST00000428082 HELLSQ9NRZ9 838 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 PRDX5P30044 214 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 DNM1Q05193 864 aaKnown RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 LRRFIP1Q32MZ4 808 aaKnown RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 NECAB1Q8N987 351 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 FBXW7Q969H0 707 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 SEC62Q99442 399 aaKnown RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 ZNF646O15015 1829 aaPredicted RBP18.43■□□□□ 0.54
TVP23C-203ENST00000428082 FAM205AQ6ZU69 1335 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 SALL1Q9NSC2 1324 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 CCDC88AQ3V6T2 1871 aa18.43■□□□□ 0.54
TVP23C-203ENST00000428082 PDE6AP16499 860 aa18.42■□□□□ 0.54
TVP23C-203ENST00000428082 ADD2P35612 726 aa18.42■□□□□ 0.54
TVP23C-203ENST00000428082 SCAND2PQ9GZW5 306 aaPredicted RBP18.42■□□□□ 0.54
TVP23C-203ENST00000428082 RAI14Q9P0K7 980 aa18.42■□□□□ 0.54
TVP23C-203ENST00000428082 LTBP3Q9NS15 1303 aa18.42■□□□□ 0.54
TVP23C-203ENST00000428082 TCHHQ07283 1943 aa18.42■□□□□ 0.54
TVP23C-203ENST00000428082 YDJCA8MPS7 323 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
TVP23C-203ENST00000428082 PRELPP51888 382 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 TOB2Q14106 344 aaPredicted RBP18.41■□□□□ 0.54
TVP23C-203ENST00000428082 GRIK5Q16478 980 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 MFSD14BQ5SR56 506 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 ZMYM1Q5SVZ6 1142 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 TTLL5Q6EMB2 1281 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 MAGEB6Q8N7X4 407 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 ZNF532Q9HCE3 1301 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 PTMAP06454 111 aaKnown RBP18.41■□□□□ 0.54
TVP23C-203ENST00000428082 ZFYP08048 801 aaPredicted RBP18.41■□□□□ 0.54
TVP23C-203ENST00000428082 ZSCAN25Q6NSZ9 544 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 ZNF384Q8TF68 577 aa18.41■□□□□ 0.54
TVP23C-203ENST00000428082 TCRBV5S4A2TA0A5A2 114 aa18.4■□□□□ 0.54
TVP23C-203ENST00000428082 ARHGAP27Q6ZUM4 889 aa18.4■□□□□ 0.54
TVP23C-203ENST00000428082 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
TVP23C-203ENST00000428082 DSCC1Q9BVC3 393 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms