RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 BEGAINQ9BUH8 593 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 R3HDMLQ9H3Y0 253 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 GPR108Q9NPR9 543 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 USP40Q9NVE5 1235 aa15.72■□□□□ 0.11
GPC1-204ENST00000426280 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
GPC1-204ENST00000426280 GORABQ5T7V8 394 aa15.71■□□□□ 0.11
GPC1-204ENST00000426280 MIGA2Q7L4E1 593 aa15.71■□□□□ 0.11
GPC1-204ENST00000426280 SLC10A4Q96EP9 437 aa15.71■□□□□ 0.11
GPC1-204ENST00000426280 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
GPC1-204ENST00000426280 NDUFB9Q9Y6M9 179 aa15.71■□□□□ 0.11
GPC1-204ENST00000426280 GAKO14976 1311 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 MAST3O60307 1309 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 PDS5AQ29RF7 1337 aaKnown RBP15.7■□□□□ 0.1
GPC1-204ENST00000426280 PPP1R12BO60237 982 aaPredicted RBP15.7■□□□□ 0.1
GPC1-204ENST00000426280 CAPN15O75808 1086 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 TM4SF4P48230 202 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 TNFAIP1Q13829 316 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 ELP3Q9H9T3 547 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 IL1RAPL2Q9NP60 686 aa15.7■□□□□ 0.1
GPC1-204ENST00000426280 DDX4Q9NQI0 724 aaKnown RBP15.7■□□□□ 0.1
GPC1-204ENST00000426280 TBC1D8O95759 1140 aa15.69■□□□□ 0.1
GPC1-204ENST00000426280 CYP2E1P05181 493 aaPredicted RBP15.69■□□□□ 0.1
GPC1-204ENST00000426280 FAM83AQ86UY5 434 aa15.69■□□□□ 0.1
GPC1-204ENST00000426280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.69■□□□□ 0.1
GPC1-204ENST00000426280 NSUN4Q96CB9 384 aaKnown RBP15.69■□□□□ 0.1
GPC1-204ENST00000426280 FAM163AQ96GL9 167 aaPredicted RBP15.69■□□□□ 0.1
GPC1-204ENST00000426280 DDX19BQ9UMR2 479 aa15.69■□□□□ 0.1
GPC1-204ENST00000426280 MS4A1P11836 297 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 ZAP70P43403 619 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 IREB2P48200 963 aaKnown RBP15.68■□□□□ 0.1
GPC1-204ENST00000426280 TNNI2P48788 182 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 RHBDL3P58872 404 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 FKBP1CQ5VVH2 108 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 FAM151AQ8WW52 585 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 ZKSCAN4Q969J2 545 aaPredicted RBP15.68■□□□□ 0.1
GPC1-204ENST00000426280 PTPN18Q99952 460 aa15.68■□□□□ 0.1
GPC1-204ENST00000426280 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
GPC1-204ENST00000426280 GPR75-ASB3A0A0A6YYF3 556 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 APBB1O00213 710 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
GPC1-204ENST00000426280 BTDP43251 543 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 RGS3P49796 1198 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 MAP3K9P80192 1104 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 VGLL4Q14135 290 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 PDE3AQ14432 1141 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 ADGRA1Q86SQ6 560 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 DZIP1Q86YF9 867 aaKnown RBP15.67■□□□□ 0.1
GPC1-204ENST00000426280 RPAP2Q8IXW5 612 aaPredicted RBP15.67■□□□□ 0.1
GPC1-204ENST00000426280 ANKRD13AQ8IZ07 590 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 OTOFQ9HC10 1997 aa15.67■□□□□ 0.1
GPC1-204ENST00000426280 RFX7Q2KHR2 1363 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 CASP8AP2Q9UKL3 1982 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 DDTLA6NHG4 134 aaPredicted RBP15.66■□□□□ 0.1
GPC1-204ENST00000426280 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
GPC1-204ENST00000426280 CA12O43570 354 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 UQCRFS1P1P0C7P4 283 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 INPP5BP32019 993 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 ZGPATQ8N5A5 531 aaKnown RBP15.66■□□□□ 0.1
GPC1-204ENST00000426280 OPTNQ96CV9 577 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 MS4A4AQ96JQ5 239 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 ANTXR1Q9H6X2 564 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 SAGE1Q9NXZ1 904 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 RAI14Q9P0K7 980 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 SNCAIPQ9Y6H5 919 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 AKAP11Q9UKA4 1901 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 MYH2Q9UKX2 1941 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 MROH7-TTC4A0A0A0MT08 1334 aa15.66■□□□□ 0.1
GPC1-204ENST00000426280 CCDC158Q5M9N0 1113 aa15.65■□□□□ 0.1
GPC1-204ENST00000426280 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
GPC1-204ENST00000426280 AACSQ86V21 672 aa15.65■□□□□ 0.1
GPC1-204ENST00000426280 ZNF512BQ96KM6 892 aaPredicted RBP15.65■□□□□ 0.1
GPC1-204ENST00000426280 IDI2Q9BXS1 227 aa15.65■□□□□ 0.1
GPC1-204ENST00000426280 BCL11AQ9H165 835 aa15.65■□□□□ 0.1
GPC1-204ENST00000426280 ATRNL1Q5VV63 1379 aa15.64■□□□□ 0.09
GPC1-204ENST00000426280 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
GPC1-204ENST00000426280 LRP2BPQ9P2M1 347 aa15.64■□□□□ 0.09
GPC1-204ENST00000426280 MYO5AQ9Y4I1 1855 aaKnown RBP15.63■□□□□ 0.09
GPC1-204ENST00000426280 UNCXA6NJT0 531 aa15.63■□□□□ 0.09
GPC1-204ENST00000426280 PICALMQ13492 652 aa15.63■□□□□ 0.09
GPC1-204ENST00000426280 REM2Q8IYK8 340 aaPredicted RBP15.63■□□□□ 0.09
GPC1-204ENST00000426280 SH3RF3Q8TEJ3 882 aaPredicted RBP15.63■□□□□ 0.09
GPC1-204ENST00000426280 WRNIP1Q96S55 665 aa15.63■□□□□ 0.09
GPC1-204ENST00000426280 ZNF112Q9UJU3 913 aa15.63■□□□□ 0.09
GPC1-204ENST00000426280 TESPA1A2RU30 521 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 PHF20L1A8MW92 1017 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 ENTPD3O75355 529 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 ZBTB48P10074 688 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 RRP1P56182 461 aaKnown RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 DYNLL1P63167 89 aaKnown RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 CAP1Q01518 475 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.62■□□□□ 0.09
GPC1-204ENST00000426280 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 OTUD5Q96G74 571 aa15.62■□□□□ 0.09
GPC1-204ENST00000426280 ABHD8Q96I13 439 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms