RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 SDSP20132 328 aa29.04■■■□□ 2.24
APOE-202ENST00000425718 BTDP43251 543 aa29.04■■■□□ 2.24
APOE-202ENST00000425718 TNFAIP1Q13829 316 aa29.04■■■□□ 2.24
APOE-202ENST00000425718 ZNF784Q8NCA9 323 aaPredicted RBP29.04■■■□□ 2.24
APOE-202ENST00000425718 APOBEC3HQ6NTF7 200 aaKnown RBP29.03■■■□□ 2.24
APOE-202ENST00000425718 APOBEC3FQ8IUX4 373 aaKnown RBP29.03■■■□□ 2.24
APOE-202ENST00000425718 ZNF384Q8TF68 577 aa29.03■■■□□ 2.24
APOE-202ENST00000425718 PRMT6Q96LA8 375 aaPredicted RBP29.03■■■□□ 2.24
APOE-202ENST00000425718 TCRBV5S4A2TA0A5A2 114 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 SPDYE2Q495Y8 402 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 FKBP1CQ5VVH2 108 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 DCPSQ96C86 337 aaKnown RBP29.02■■■□□ 2.24
APOE-202ENST00000425718 DIAPH3Q9NSV4 1193 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 PGAP2Q9UHJ9 254 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 CLEC11AQ9Y240 323 aa29.02■■■□□ 2.24
APOE-202ENST00000425718 FOCADQ5VW36 1801 aa29.01■■■□□ 2.24
APOE-202ENST00000425718 MAGEB6P1A0A0J9YX57 407 aa29.01■■■□□ 2.23
APOE-202ENST00000425718 TNNI2P48788 182 aa29.01■■■□□ 2.23
APOE-202ENST00000425718 NBPF9Q3BBW0 867 aa29.01■■■□□ 2.23
APOE-202ENST00000425718 HELLSQ9NRZ9 838 aa29.01■■■□□ 2.23
APOE-202ENST00000425718 CDK5RAP2Q96SN8 1893 aa29.01■■■□□ 2.23
APOE-202ENST00000425718 MFAP1P55081 439 aaKnown RBP29■■■□□ 2.23
APOE-202ENST00000425718 RUFY2Q8WXA3 655 aa29■■■□□ 2.23
APOE-202ENST00000425718 AIDAQ96BJ3 306 aa29■■■□□ 2.23
APOE-202ENST00000425718 USP40Q9NVE5 1235 aa29■■■□□ 2.23
APOE-202ENST00000425718 AATFQ9NY61 560 aaKnown RBP eCLIP29■■■□□ 2.23
APOE-202ENST00000425718 EGFRP00533 1210 aa28.99■■■□□ 2.23
APOE-202ENST00000425718 HIRAP54198 1017 aaPredicted RBP28.99■■■□□ 2.23
APOE-202ENST00000425718 ZMYM1Q5SVZ6 1142 aa28.99■■■□□ 2.23
APOE-202ENST00000425718 CASC1Q6TDU7 716 aa28.99■■■□□ 2.23
APOE-202ENST00000425718 TDRD3Q9H7E2 651 aaKnown RBP28.99■■■□□ 2.23
APOE-202ENST00000425718 ZNF70Q9UC06 446 aaPredicted RBP28.99■■■□□ 2.23
APOE-202ENST00000425718 NPM3O75607 178 aaKnown RBP28.98■■■□□ 2.23
APOE-202ENST00000425718 CDC42EP5Q6NZY7 148 aa28.98■■■□□ 2.23
APOE-202ENST00000425718 CRNKL1Q9BZJ0 848 aaKnown RBP28.98■■■□□ 2.23
APOE-202ENST00000425718 GGA3Q9NZ52 723 aa28.98■■■□□ 2.23
APOE-202ENST00000425718 PPP2R3BQ9Y5P8 575 aa28.98■■■□□ 2.23
APOE-202ENST00000425718 GNAT2P19087 354 aa28.97■■■□□ 2.23
APOE-202ENST00000425718 SULF1Q8IWU6 871 aa28.97■■■□□ 2.23
APOE-202ENST00000425718 KIF3CO14782 793 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 ANGEL2Q5VTE6 544 aaKnown RBP28.96■■■□□ 2.23
APOE-202ENST00000425718 ADGRA1Q86SQ6 560 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 SKAP1Q86WV1 359 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 TEX11Q8IYF3 940 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 IDI2Q9BXS1 227 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 VEZTQ9HBM0 779 aa28.96■■■□□ 2.23
APOE-202ENST00000425718 RAD50Q92878 1312 aa28.95■■■□□ 2.23
APOE-202ENST00000425718 MCMDC2Q4G0Z9 681 aa28.95■■■□□ 2.22
APOE-202ENST00000425718 CDC37L1Q7L3B6 337 aa28.95■■■□□ 2.22
APOE-202ENST00000425718 FAM83AQ86UY5 434 aa28.95■■■□□ 2.22
APOE-202ENST00000425718 MIGA1Q8NAN2 632 aa28.95■■■□□ 2.22
APOE-202ENST00000425718 DDRGK1Q96HY6 314 aa28.95■■■□□ 2.22
APOE-202ENST00000425718 RIOK1Q9BRS2 568 aaKnown RBP28.95■■■□□ 2.22
APOE-202ENST00000425718 RPAP1Q9BWH6 1393 aaPredicted RBP28.94■■■□□ 2.22
APOE-202ENST00000425718 TOMM70O94826 608 aa28.94■■■□□ 2.22
APOE-202ENST00000425718 RHBDL3P58872 404 aa28.94■■■□□ 2.22
APOE-202ENST00000425718 CHADLQ6NUI6 762 aa28.94■■■□□ 2.22
APOE-202ENST00000425718 RBM46Q8TBY0 533 aaKnown RBP28.94■■■□□ 2.22
APOE-202ENST00000425718 PCDHAC2Q9Y5I4 1007 aa28.94■■■□□ 2.22
APOE-202ENST00000425718 MYH1P12882 1939 aa28.94■■■□□ 2.22
APOE-202ENST00000425718 CLRN2A0PK11 232 aa28.93■■■□□ 2.22
APOE-202ENST00000425718 ENTPD3O75355 529 aa28.93■■■□□ 2.22
APOE-202ENST00000425718 MBD4O95243 580 aa28.93■■■□□ 2.22
APOE-202ENST00000425718 SMC1BQ8NDV3 1235 aa28.93■■■□□ 2.22
APOE-202ENST00000425718 OSBP2Q969R2 916 aa28.93■■■□□ 2.22
APOE-202ENST00000425718 PUS7LQ9H0K6 701 aaKnown RBP28.93■■■□□ 2.22
APOE-202ENST00000425718 CDC45O75419 566 aa28.92■■■□□ 2.22
APOE-202ENST00000425718 NAV1Q8NEY1 1877 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 GPAA1O43292 621 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 CHMLP26374 656 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 USP5P45974 858 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 NMIQ13287 307 aaPredicted RBP28.91■■■□□ 2.22
APOE-202ENST00000425718 KRT26Q7Z3Y9 468 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 SH3RF3Q8TEJ3 882 aaPredicted RBP28.91■■■□□ 2.22
APOE-202ENST00000425718 HOOK2Q96ED9 719 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 ATP8A2Q9NTI2 1148 aa28.91■■■□□ 2.22
APOE-202ENST00000425718 EIF5BO60841 1220 aaKnown RBP28.9■■■□□ 2.22
APOE-202ENST00000425718 DYNLL1P63167 89 aaKnown RBP28.9■■■□□ 2.22
APOE-202ENST00000425718 FAM151AQ8WW52 585 aa28.9■■■□□ 2.22
APOE-202ENST00000425718 TRPM7Q96QT4 1865 aa28.9■■■□□ 2.22
APOE-202ENST00000425718 COL2A1P02458 1487 aaPredicted RBP28.9■■■□□ 2.22
APOE-202ENST00000425718 WDHD1O75717 1129 aaPredicted RBP28.89■■■□□ 2.22
APOE-202ENST00000425718 FSTL1Q12841 308 aa28.89■■■□□ 2.22
APOE-202ENST00000425718 GIMAP6Q6P9H5 292 aa28.89■■■□□ 2.22
APOE-202ENST00000425718 CWC27Q6UX04 472 aaKnown RBP28.89■■■□□ 2.22
APOE-202ENST00000425718 LCORLQ8N3X6 602 aa28.89■■■□□ 2.22
APOE-202ENST00000425718 STRBPQ96SI9 672 aaKnown RBP28.89■■■□□ 2.22
APOE-202ENST00000425718 ARMT1Q9H993 441 aa28.89■■■□□ 2.22
APOE-202ENST00000425718 TCP10L2B9ZVM9 353 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 AMOTL1Q8IY63 956 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 TGFBRAP1Q8WUH2 860 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 FAM227BQ96M60 508 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 NACAP1Q9BZK3 213 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 DEFB129Q9H1M3 183 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 CCDC171Q6TFL3 1326 aa28.88■■■□□ 2.21
APOE-202ENST00000425718 A0A0D9SFI3 127 aa28.87■■■□□ 2.21
APOE-202ENST00000425718 M0R2C6 588 aa28.87■■■□□ 2.21
APOE-202ENST00000425718 DHX36Q9H2U1 1008 aaKnown RBP28.87■■■□□ 2.21
APOE-202ENST00000425718 SLC4A4Q9Y6R1 1079 aa28.87■■■□□ 2.21
APOE-202ENST00000425718 ASTN2O75129 1339 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms