RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 DGKZQ13574 1117 aa26.57■■□□□ 1.84
CDCP1-202ENST00000425231 HMG20BQ9P0W2 317 aa26.57■■□□□ 1.84
CDCP1-202ENST00000425231 ABCF2Q9UG63 623 aa26.57■■□□□ 1.84
CDCP1-202ENST00000425231 MYH2Q9UKX2 1941 aa26.57■■□□□ 1.84
CDCP1-202ENST00000425231 RPAP1Q9BWH6 1393 aaPredicted RBP26.57■■□□□ 1.84
CDCP1-202ENST00000425231 SURF6O75683 361 aaKnown RBP26.56■■□□□ 1.84
CDCP1-202ENST00000425231 ARID4AP29374 1257 aaPredicted RBP26.56■■□□□ 1.84
CDCP1-202ENST00000425231 FAM151AQ8WW52 585 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 CFHR5Q9BXR6 569 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 ELP3Q9H9T3 547 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 GPR108Q9NPR9 543 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 USP40Q9NVE5 1235 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 NOP58Q9Y2X3 529 aaKnown RBP26.56■■□□□ 1.84
CDCP1-202ENST00000425231 NFIAQ12857 509 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 VGLL4Q14135 290 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 GORABQ5T7V8 394 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 IFNL1Q8IU54 200 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 OPTNQ96CV9 577 aa26.56■■□□□ 1.84
CDCP1-202ENST00000425231 GAKO14976 1311 aa26.55■■□□□ 1.84
CDCP1-202ENST00000425231 SPTY2D1Q68D10 685 aaPredicted RBP26.55■■□□□ 1.84
CDCP1-202ENST00000425231 PI16Q6UXB8 463 aa26.55■■□□□ 1.84
CDCP1-202ENST00000425231 SPATA5Q8NB90 893 aa26.55■■□□□ 1.84
CDCP1-202ENST00000425231 FAM163AQ96GL9 167 aaPredicted RBP26.55■■□□□ 1.84
CDCP1-202ENST00000425231 FAM198AQ9UFP1 575 aa26.55■■□□□ 1.84
CDCP1-202ENST00000425231 TCP10Q12799 353 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 TNNI3KQ59H18 835 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 NOM1Q5C9Z4 860 aaKnown RBP26.54■■□□□ 1.84
CDCP1-202ENST00000425231 CEP85Q6P2H3 762 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 DZIP1Q86YF9 867 aaKnown RBP26.54■■□□□ 1.84
CDCP1-202ENST00000425231 HOOK2Q96ED9 719 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 R3HDMLQ9H3Y0 253 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 FPGT-TNNI3KV9GXZ4 949 aa26.54■■□□□ 1.84
CDCP1-202ENST00000425231 IGF2BP3O00425 579 aaKnown RBP eCLIP26.53■■□□□ 1.84
CDCP1-202ENST00000425231 ALDH1A1P00352 501 aa26.53■■□□□ 1.84
CDCP1-202ENST00000425231 OS9Q13438 667 aaPredicted RBP26.53■■□□□ 1.84
CDCP1-202ENST00000425231 ZNF384Q8TF68 577 aa26.53■■□□□ 1.84
CDCP1-202ENST00000425231 ZNF296Q8WUU4 475 aaPredicted RBP26.53■■□□□ 1.84
CDCP1-202ENST00000425231 CNKSR2Q8WXI2 1034 aa26.53■■□□□ 1.84
CDCP1-202ENST00000425231 TESPA1A2RU30 521 aaPredicted RBP26.52■■□□□ 1.84
CDCP1-202ENST00000425231 GPR25O00155 361 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 MS4A1P11836 297 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 MCAMP43121 646 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 MECOMQ03112 1051 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 ERICH6Q7L0X2 663 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 MS4A4AQ96JQ5 239 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 CSADQ9Y600 493 aa26.52■■□□□ 1.84
CDCP1-202ENST00000425231 TBC1D9Q6ZT07 1266 aa26.51■■□□□ 1.83
CDCP1-202ENST00000425231 MIGA2Q7L4E1 593 aa26.51■■□□□ 1.83
CDCP1-202ENST00000425231 SLF2Q8IX21 1173 aa26.51■■□□□ 1.83
CDCP1-202ENST00000425231 PTPN18Q99952 460 aa26.51■■□□□ 1.83
CDCP1-202ENST00000425231 UQCRFS1P1P0C7P4 283 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 DCAF15Q66K64 600 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 ZFPM1Q8IX07 1006 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 ZKSCAN4Q969J2 545 aaPredicted RBP26.5■■□□□ 1.83
CDCP1-202ENST00000425231 WRNIP1Q96S55 665 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 DBNDD2Q9BQY9 259 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 IDI2Q9BXS1 227 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 SNCAIPQ9Y6H5 919 aa26.5■■□□□ 1.83
CDCP1-202ENST00000425231 CTU1Q7Z7A3 348 aaKnown RBP26.49■■□□□ 1.83
CDCP1-202ENST00000425231 NSUN4Q96CB9 384 aaKnown RBP26.48■■□□□ 1.83
CDCP1-202ENST00000425231 ZNF341Q9BYN7 854 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 AK9Q5TCS8 1911 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 MROH7-TTC4A0A0A0MT08 1334 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 RFX7Q2KHR2 1363 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 GPR75-ASB3A0A0A6YYF3 556 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 SPDYE5A6NIY4 337 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 CCDC85CA6NKD9 419 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 BTDP43251 543 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 RGS3P49796 1198 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 ZNF112Q9UJU3 913 aa26.48■■□□□ 1.83
CDCP1-202ENST00000425231 ENTPD3O75355 529 aa26.47■■□□□ 1.83
CDCP1-202ENST00000425231 WDHD1O75717 1129 aaPredicted RBP26.47■■□□□ 1.83
CDCP1-202ENST00000425231 CCDC158Q5M9N0 1113 aa26.47■■□□□ 1.83
CDCP1-202ENST00000425231 OTUD5Q96G74 571 aa26.47■■□□□ 1.83
CDCP1-202ENST00000425231 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
CDCP1-202ENST00000425231 TTC39AQ5SRH9 613 aa26.46■■□□□ 1.83
CDCP1-202ENST00000425231 OTUD7BQ6GQQ9 843 aa26.46■■□□□ 1.83
CDCP1-202ENST00000425231 ERO1BQ86YB8 467 aa26.46■■□□□ 1.83
CDCP1-202ENST00000425231 EAF2Q96CJ1 260 aaPredicted RBP26.46■■□□□ 1.83
CDCP1-202ENST00000425231 ZNF512BQ96KM6 892 aaPredicted RBP26.46■■□□□ 1.83
CDCP1-202ENST00000425231 DBNLQ9UJU6 430 aaKnown RBP26.46■■□□□ 1.83
CDCP1-202ENST00000425231 INPP5BP32019 993 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 GTF2A2P52657 109 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 RHBDL3P58872 404 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 SH3BP5LQ7L8J4 393 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 BRI3BPQ8WY22 251 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 DDX4Q9NQI0 724 aaKnown RBP26.45■■□□□ 1.82
CDCP1-202ENST00000425231 SNRKQ9NRH2 765 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 ZBTB40Q9NUA8 1239 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 DDX19BQ9UMR2 479 aa26.45■■□□□ 1.82
CDCP1-202ENST00000425231 FKTNO75072 461 aa26.44■■□□□ 1.82
CDCP1-202ENST00000425231 GSTO1P78417 241 aa26.44■■□□□ 1.82
CDCP1-202ENST00000425231 CCDC8Q9H0W5 538 aaPredicted RBP26.44■■□□□ 1.82
CDCP1-202ENST00000425231 TLR7Q9NYK1 1049 aaKnown RBP26.44■■□□□ 1.82
CDCP1-202ENST00000425231 RAI14Q9P0K7 980 aa26.44■■□□□ 1.82
CDCP1-202ENST00000425231 EXOC6BQ9Y2D4 811 aa26.44■■□□□ 1.82
CDCP1-202ENST00000425231 ATRNL1Q5VV63 1379 aa26.43■■□□□ 1.82
CDCP1-202ENST00000425231 LDHCP07864 332 aa26.43■■□□□ 1.82
CDCP1-202ENST00000425231 LRP2BPQ9P2M1 347 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms