RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 ATP1A3P13637 1013 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
MSH5-206ENST00000423982 TIMM10P62072 90 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 NLRP10Q86W26 655 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 ISCA1Q9BUE6 129 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 UTRNP46939 3433 aa16.63■□□□□ 0.25
MSH5-206ENST00000423982 FANCGO15287 622 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 NUP188Q5SRE5 1749 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 KIAA1468Q9P260 1216 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 CLCN6P51797 869 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 KBTBD3Q8NAB2 608 aa16.62■□□□□ 0.25
MSH5-206ENST00000423982 GSDMDP57764 484 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 HAND2P61296 217 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 ARHGEF1Q92888 912 aaKnown RBP16.61■□□□□ 0.25
MSH5-206ENST00000423982 NAT10Q9H0A0 1025 aaKnown RBP16.61■□□□□ 0.25
MSH5-206ENST00000423982 EPC1Q9H2F5 836 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 CNTNAP4Q9C0A0 1308 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 SFPQP23246 707 aaKnown RBP eCLIP16.61■□□□□ 0.25
MSH5-206ENST00000423982 STK38Q15208 465 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
MSH5-206ENST00000423982 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 L2HGDHQ9H9P8 463 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 HSPD1P10809 573 aaKnown RBP16.61■□□□□ 0.25
MSH5-206ENST00000423982 H2AFXP16104 143 aaPredicted RBP16.61■□□□□ 0.25
MSH5-206ENST00000423982 CASP7P55210 303 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 NCAPHQ15003 741 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 ARHGAP29Q52LW3 1261 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
MSH5-206ENST00000423982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.6■□□□□ 0.25
MSH5-206ENST00000423982 RPS6KA4O75676 772 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 SUSD4Q5VX71 490 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 DPF2Q92785 391 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 DNAI1Q9UI46 699 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 COL5A3P25940 1745 aaPredicted RBP16.6■□□□□ 0.25
MSH5-206ENST00000423982 H7C1W4 665 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 ZPR1O75312 459 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 RFC4P35249 363 aa16.6■□□□□ 0.25
MSH5-206ENST00000423982 EN1Q05925 392 aaPredicted RBP16.6■□□□□ 0.25
MSH5-206ENST00000423982 KIF28PB7ZC32 967 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 ZRSR1Q15695 479 aaKnown RBP16.59■□□□□ 0.25
MSH5-206ENST00000423982 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 AGXT2Q9BYV1 514 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 RTEL1Q9NZ71 1219 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.59■□□□□ 0.255e-8■■□□□ 12.7
MSH5-206ENST00000423982 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
MSH5-206ENST00000423982 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 FAM177A1Q8N128 213 aaPredicted RBP16.59■□□□□ 0.25
MSH5-206ENST00000423982 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
MSH5-206ENST00000423982 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 TMX1Q9H3N1 280 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 PAG1Q9NWQ8 432 aa16.59■□□□□ 0.25
MSH5-206ENST00000423982 MAST3O60307 1309 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 ZNF202O95125 648 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.25
MSH5-206ENST00000423982 HMGB1P09429 215 aaKnown RBP16.58■□□□□ 0.25
MSH5-206ENST00000423982 HSP90AA4PQ58FG1 418 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 HSD3B7Q9H2F3 369 aa16.58■□□□□ 0.25
MSH5-206ENST00000423982 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
MSH5-206ENST00000423982 M0R2C6 588 aa16.58■□□□□ 0.24
MSH5-206ENST00000423982 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.24
MSH5-206ENST00000423982 FOXO4P98177 505 aa16.58■□□□□ 0.24
MSH5-206ENST00000423982 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
MSH5-206ENST00000423982 IMPACTQ9P2X3 320 aa16.58■□□□□ 0.24
MSH5-206ENST00000423982 PLA2G4AP47712 749 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 DEFB132Q7Z7B7 95 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
MSH5-206ENST00000423982 TMEM51Q9NW97 253 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 IRS4O14654 1257 aaPredicted RBP16.57■□□□□ 0.24
MSH5-206ENST00000423982 SPTLC2O15270 562 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 PNMA6AP0CW24 399 aaPredicted RBP16.57■□□□□ 0.24
MSH5-206ENST00000423982 FANCCQ00597 558 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 ZNF34Q8IZ26 560 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 NUP98P52948 1817 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 LY75O60449 1722 aa16.57■□□□□ 0.24
MSH5-206ENST00000423982 WDHD1O75717 1129 aaPredicted RBP16.56■□□□□ 0.24
MSH5-206ENST00000423982 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
MSH5-206ENST00000423982 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
MSH5-206ENST00000423982 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 C8orf76Q96K31 380 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
MSH5-206ENST00000423982 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 PFKFB1P16118 471 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 BBXQ8WY36 941 aaPredicted RBP16.56■□□□□ 0.24
MSH5-206ENST00000423982 ZBTB9Q96C00 473 aa16.56■□□□□ 0.24
MSH5-206ENST00000423982 C4BP0C0L5 1744 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms