RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 AKAP11Q9UKA4 1901 aa32.36■■■□□ 2.77
CDK9-202ENST00000421939 RAB11FIP3O75154 756 aa32.36■■■□□ 2.77
CDK9-202ENST00000421939 TBC1D9Q6ZT07 1266 aa32.36■■■□□ 2.77
CDK9-202ENST00000421939 MECOMQ03112 1051 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 CDC42EP5Q6NZY7 148 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 FAM83AQ86UY5 434 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 CDAN1Q8IWY9 1227 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 SNRKQ9NRH2 765 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 FZD1Q9UP38 647 aa32.35■■■□□ 2.77
CDK9-202ENST00000421939 CLASRPQ8N2M8 674 aaKnown RBP32.34■■■□□ 2.77
CDK9-202ENST00000421939 ZIC5Q96T25 663 aa32.34■■■□□ 2.77
CDK9-202ENST00000421939 MROH7-TTC4A0A0A0MT08 1334 aa32.33■■■□□ 2.77
CDK9-202ENST00000421939 FOXN1O15353 648 aa32.33■■■□□ 2.77
CDK9-202ENST00000421939 MAP3K11Q16584 847 aa32.33■■■□□ 2.77
CDK9-202ENST00000421939 LDLRAD1Q5T700 205 aa32.33■■■□□ 2.77
CDK9-202ENST00000421939 FAM163AQ96GL9 167 aaPredicted RBP32.33■■■□□ 2.77
CDK9-202ENST00000421939 RPAP1Q9BWH6 1393 aaPredicted RBP32.32■■■□□ 2.77
CDK9-202ENST00000421939 MAST2Q6P0Q8 1798 aa32.32■■■□□ 2.77
CDK9-202ENST00000421939 ZNF384Q8TF68 577 aa32.32■■■□□ 2.76
CDK9-202ENST00000421939 USP40Q9NVE5 1235 aa32.32■■■□□ 2.76
CDK9-202ENST00000421939 RAI14Q9P0K7 980 aa32.32■■■□□ 2.76
CDK9-202ENST00000421939 LRP2BPQ9P2M1 347 aa32.32■■■□□ 2.76
CDK9-202ENST00000421939 GSTO1P78417 241 aa32.31■■■□□ 2.76
CDK9-202ENST00000421939 NSUN4Q96CB9 384 aaKnown RBP32.31■■■□□ 2.76
CDK9-202ENST00000421939 BEGAINQ9BUH8 593 aa32.31■■■□□ 2.76
CDK9-202ENST00000421939 ZAP70P43403 619 aa32.3■■■□□ 2.76
CDK9-202ENST00000421939 IREB2P48200 963 aaKnown RBP32.3■■■□□ 2.76
CDK9-202ENST00000421939 CYP2E1P05181 493 aaPredicted RBP32.29■■■□□ 2.76
CDK9-202ENST00000421939 KIF23Q02241 960 aaPredicted RBP32.29■■■□□ 2.76
CDK9-202ENST00000421939 NFIAQ12857 509 aa32.29■■■□□ 2.76
CDK9-202ENST00000421939 BTDP43251 543 aa32.28■■■□□ 2.76
CDK9-202ENST00000421939 CTCFP49711 727 aaPredicted RBP32.28■■■□□ 2.76
CDK9-202ENST00000421939 CRBNQ96SW2 442 aa32.28■■■□□ 2.76
CDK9-202ENST00000421939 RFX7Q2KHR2 1363 aa32.28■■■□□ 2.76
CDK9-202ENST00000421939 USP2O75604 605 aaPredicted RBP32.27■■■□□ 2.76
CDK9-202ENST00000421939 LDHCP07864 332 aa32.27■■■□□ 2.76
CDK9-202ENST00000421939 IFIT2P09913 472 aaKnown RBP32.27■■■□□ 2.76
CDK9-202ENST00000421939 FAM151AQ8WW52 585 aa32.27■■■□□ 2.76
CDK9-202ENST00000421939 OTOFQ9HC10 1997 aa32.27■■■□□ 2.76
CDK9-202ENST00000421939 GPR75-ASB3A0A0A6YYF3 556 aa32.26■■■□□ 2.75
CDK9-202ENST00000421939 UNCXA6NJT0 531 aa32.26■■■□□ 2.75
CDK9-202ENST00000421939 TCP10Q12799 353 aa32.26■■■□□ 2.75
CDK9-202ENST00000421939 FAM198AQ9UFP1 575 aa32.26■■■□□ 2.75
CDK9-202ENST00000421939 HOOK2Q96ED9 719 aa32.25■■■□□ 2.75
CDK9-202ENST00000421939 CLMNQ96JQ2 1002 aa32.25■■■□□ 2.75
CDK9-202ENST00000421939 LRRCC1Q9C099 1032 aa32.25■■■□□ 2.75
CDK9-202ENST00000421939 BCL11AQ9H165 835 aa32.25■■■□□ 2.75
CDK9-202ENST00000421939 PIH1D3Q9NQM4 214 aaKnown RBP32.25■■■□□ 2.75
CDK9-202ENST00000421939 IDI2Q9BXS1 227 aa32.24■■■□□ 2.75
CDK9-202ENST00000421939 PCDHB15Q9Y5E8 787 aa32.24■■■□□ 2.75
CDK9-202ENST00000421939 CA12O43570 354 aa32.23■■■□□ 2.75
CDK9-202ENST00000421939 IGSF3O75054 1194 aa32.23■■■□□ 2.75
CDK9-202ENST00000421939 NAA16Q6N069 864 aaPredicted RBP32.23■■■□□ 2.75
CDK9-202ENST00000421939 ANKRD13AQ8IZ07 590 aa32.23■■■□□ 2.75
CDK9-202ENST00000421939 SLC10A4Q96EP9 437 aa32.23■■■□□ 2.75
CDK9-202ENST00000421939 HSPA8P11142 646 aaKnown RBP32.22■■■□□ 2.75
CDK9-202ENST00000421939 RGS3P49796 1198 aa32.22■■■□□ 2.75
CDK9-202ENST00000421939 RHBDL3P58872 404 aa32.22■■■□□ 2.75
CDK9-202ENST00000421939 DCTPP1Q9H773 170 aa32.22■■■□□ 2.75
CDK9-202ENST00000421939 NDUFB9Q9Y6M9 179 aa32.22■■■□□ 2.75
CDK9-202ENST00000421939 MYO5AQ9Y4I1 1855 aaKnown RBP32.22■■■□□ 2.75
CDK9-202ENST00000421939 ENTPD3O75355 529 aa32.21■■■□□ 2.75
CDK9-202ENST00000421939 WDHD1O75717 1129 aaPredicted RBP32.21■■■□□ 2.75
CDK9-202ENST00000421939 MKRN3Q13064 507 aaKnown RBP32.21■■■□□ 2.75
CDK9-202ENST00000421939 REM2Q8IYK8 340 aaPredicted RBP32.21■■■□□ 2.75
CDK9-202ENST00000421939 CSRNP1Q96S65 589 aa32.21■■■□□ 2.75
CDK9-202ENST00000421939 MAP4K4O95819 1239 aaPredicted RBP32.2■■■□□ 2.75
CDK9-202ENST00000421939 SPRYD7Q5W111 196 aa32.2■■■□□ 2.75
CDK9-202ENST00000421939 DCAF15Q66K64 600 aa32.2■■■□□ 2.75
CDK9-202ENST00000421939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.2■■■□□ 2.75
CDK9-202ENST00000421939 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.2■■■□□ 2.75
CDK9-202ENST00000421939 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.2■■■□□ 2.75
CDK9-202ENST00000421939 DOCK2Q92608 1830 aa32.19■■■□□ 2.74
CDK9-202ENST00000421939 IDH1O75874 414 aaKnown RBP32.19■■■□□ 2.74
CDK9-202ENST00000421939 LBX1P52954 281 aa32.19■■■□□ 2.74
CDK9-202ENST00000421939 ZFPM1Q8IX07 1006 aa32.19■■■□□ 2.74
CDK9-202ENST00000421939 NOL10Q9BSC4 688 aaKnown RBP32.19■■■□□ 2.74
CDK9-202ENST00000421939 SMARCA5O60264 1052 aaPredicted RBP32.18■■■□□ 2.74
CDK9-202ENST00000421939 WNK4Q96J92 1243 aa32.18■■■□□ 2.74
CDK9-202ENST00000421939 DDX4Q9NQI0 724 aaKnown RBP32.18■■■□□ 2.74
CDK9-202ENST00000421939 PRDM10Q9NQV6 1147 aa32.18■■■□□ 2.74
CDK9-202ENST00000421939 MAP3K9P80192 1104 aa32.17■■■□□ 2.74
CDK9-202ENST00000421939 COL13A1Q5TAT6 717 aaPredicted RBP32.17■■■□□ 2.74
CDK9-202ENST00000421939 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.17■■■□□ 2.74
CDK9-202ENST00000421939 ANTXR1Q9H6X2 564 aa32.17■■■□□ 2.74
CDK9-202ENST00000421939 TSKSQ9UJT2 592 aa32.17■■■□□ 2.74
CDK9-202ENST00000421939 AK9Q5TCS8 1911 aa32.17■■■□□ 2.74
CDK9-202ENST00000421939 ZBTB48P10074 688 aaPredicted RBP32.16■■■□□ 2.74
CDK9-202ENST00000421939 PICALMQ13492 652 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 VGLL4Q14135 290 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 ADGRA1Q86SQ6 560 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 WRNIP1Q96S55 665 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 ZNF341Q9BYN7 854 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 CSADQ9Y600 493 aa32.16■■■□□ 2.74
CDK9-202ENST00000421939 NPM3O75607 178 aaKnown RBP32.15■■■□□ 2.74
CDK9-202ENST00000421939 BAG3O95817 575 aa32.15■■■□□ 2.74
CDK9-202ENST00000421939 MIGA2Q7L4E1 593 aa32.15■■■□□ 2.74
CDK9-202ENST00000421939 ELP3Q9H9T3 547 aa32.15■■■□□ 2.74
CDK9-202ENST00000421939 SAGE1Q9NXZ1 904 aa32.15■■■□□ 2.74
CDK9-202ENST00000421939 AATFQ9NY61 560 aaKnown RBP eCLIP32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms