RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 PDILTQ8N807 584 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 MRFAP1Q9Y605 127 aa24.48■■□□□ 1.51
USP48-205ENST00000421625 CDC27P30260 824 aa24.47■■□□□ 1.51
USP48-205ENST00000421625 HSP90AB3PQ58FF7 597 aa24.47■■□□□ 1.51
USP48-205ENST00000421625 METTL16Q86W50 562 aaKnown RBP24.47■■□□□ 1.51
USP48-205ENST00000421625 FOXP4Q8IVH2 680 aaPredicted RBP24.47■■□□□ 1.51
USP48-205ENST00000421625 PARD6BQ9BYG5 372 aa24.47■■□□□ 1.51
USP48-205ENST00000421625 LRRC24Q50LG9 513 aa24.47■■□□□ 1.51
USP48-205ENST00000421625 RSRC2Q7L4I2 434 aaKnown RBP24.47■■□□□ 1.51
USP48-205ENST00000421625 BAG1Q99933 345 aaPredicted RBP24.47■■□□□ 1.51
USP48-205ENST00000421625 SLC20A2Q08357 652 aa24.46■■□□□ 1.51
USP48-205ENST00000421625 CABLES1Q8TDN4 633 aa24.46■■□□□ 1.51
USP48-205ENST00000421625 FEZ2Q9UHY8 353 aaPredicted RBP24.46■■□□□ 1.51
USP48-205ENST00000421625 KDM6AO15550 1401 aaPredicted RBP24.46■■□□□ 1.51
USP48-205ENST00000421625 OLFM4Q6UX06 510 aa24.46■■□□□ 1.51
USP48-205ENST00000421625 KIFC2Q96AC6 838 aa24.46■■□□□ 1.51
USP48-205ENST00000421625 ZNF594Q96JF6 807 aaPredicted RBP24.46■■□□□ 1.51
USP48-205ENST00000421625 ADAMTS7Q9UKP4 1686 aa24.45■■□□□ 1.51
USP48-205ENST00000421625 BMP6P22004 513 aa24.45■■□□□ 1.51
USP48-205ENST00000421625 ADKP55263 362 aaKnown RBP24.45■■□□□ 1.51
USP48-205ENST00000421625 FKBP4Q02790 459 aaKnown RBP eCLIP24.45■■□□□ 1.51
USP48-205ENST00000421625 IMMTQ16891 758 aaKnown RBP24.45■■□□□ 1.51
USP48-205ENST00000421625 FGAP02671 866 aa24.45■■□□□ 1.5
USP48-205ENST00000421625 LONRF3Q496Y0 759 aa24.45■■□□□ 1.5
USP48-205ENST00000421625 VPS37DQ86XT2 251 aa24.45■■□□□ 1.5
USP48-205ENST00000421625 ARFGAP3Q9NP61 516 aa24.45■■□□□ 1.5
USP48-205ENST00000421625 FOXN1O15353 648 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 TBX2Q13207 712 aaPredicted RBP24.44■■□□□ 1.5
USP48-205ENST00000421625 PTPAQ15257 358 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 WASHC4Q2M389 1173 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 DHX58Q96C10 678 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 DESI2Q9BSY9 194 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 FUT8Q9BYC5 575 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 A0A1B0GUL7 405 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 PCDHA5Q9Y5H7 936 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 ARFGEF2Q9Y6D5 1785 aa24.44■■□□□ 1.5
USP48-205ENST00000421625 TC2NQ8N9U0 490 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 KARSQ15046 597 aaKnown RBP24.43■■□□□ 1.5
USP48-205ENST00000421625 ALG1Q9BT22 464 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 TRIM34Q9BYJ4 488 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 DENND2AQ9ULE3 1009 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 RXRAP19793 462 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 MUM1L1Q5H9M0 696 aa24.43■■□□□ 1.5
USP48-205ENST00000421625 RESP18Q5W5W9 173 aa24.42■■□□□ 1.5
USP48-205ENST00000421625 ZSWIM4Q9H7M6 989 aa24.42■■□□□ 1.5
USP48-205ENST00000421625 PPP6R2O75170 966 aa24.42■■□□□ 1.5
USP48-205ENST00000421625 SNRPA1P09661 255 aaKnown RBP24.42■■□□□ 1.5
USP48-205ENST00000421625 GPR108Q9NPR9 543 aa24.42■■□□□ 1.5
USP48-205ENST00000421625 H3BQF6 201 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 IL15P40933 162 aaPredicted RBP24.41■■□□□ 1.5
USP48-205ENST00000421625 KRT40Q6A162 431 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 CNNM3Q8NE01 707 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 NCOA7Q8NI08 942 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 NKX2-3Q8TAU0 364 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 MAP3K14Q99558 947 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 IRX2Q9BZI1 471 aaPredicted RBP24.41■■□□□ 1.5
USP48-205ENST00000421625 C4AP0C0L4 1744 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 C4BP0C0L5 1744 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 ZSCAN26Q16670 478 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 SPECC1Q5M775 1068 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 RALYLQ86SE5 291 aaKnown RBP24.41■■□□□ 1.5
USP48-205ENST00000421625 RABGGTAQ92696 567 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 ZBTB9Q96C00 473 aa24.41■■□□□ 1.5
USP48-205ENST00000421625 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
USP48-205ENST00000421625 STX10O60499 249 aa24.4■■□□□ 1.5
USP48-205ENST00000421625 GPS2Q13227 327 aa24.4■■□□□ 1.5
USP48-205ENST00000421625 GOLGA6L9A6NEM1 432 aa24.4■■□□□ 1.5
USP48-205ENST00000421625 STRCP1A6NGW2 1772 aa24.4■■□□□ 1.5
USP48-205ENST00000421625 GOLGA1Q92805 767 aa24.4■■□□□ 1.5
USP48-205ENST00000421625 FMR1Q06787 632 aaKnown RBP eCLIP24.39■■□□□ 1.51e-9■■□□□ 13.6
USP48-205ENST00000421625 MTF1Q14872 753 aa24.39■■□□□ 1.5
USP48-205ENST00000421625 LONRF2Q1L5Z9 754 aa24.39■■□□□ 1.5
USP48-205ENST00000421625 JMYQ8N9B5 988 aa24.39■■□□□ 1.5
USP48-205ENST00000421625 CCDC12Q8WUD4 166 aaPredicted RBP24.39■■□□□ 1.5
USP48-205ENST00000421625 PHKBQ93100 1093 aa24.39■■□□□ 1.5
USP48-205ENST00000421625 KCNH3Q9ULD8 1083 aa24.39■■□□□ 1.5
USP48-205ENST00000421625 FAM237AA0A1B0GTK4 181 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 KDM4FA0A1W2PPD8 638 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 H7C1W4 665 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 CCDC102BQ68D86 513 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 PUS7LQ9H0K6 701 aaKnown RBP24.39■■□□□ 1.49
USP48-205ENST00000421625 MRPL44Q9H9J2 332 aaKnown RBP24.39■■□□□ 1.49
USP48-205ENST00000421625 EYA2O00167 538 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 TRMT44Q8IYL2 757 aaKnown RBP24.39■■□□□ 1.49
USP48-205ENST00000421625 TTC5Q8N0Z6 440 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 PLBD2Q8NHP8 589 aa24.39■■□□□ 1.49
USP48-205ENST00000421625 MST1RQ04912 1400 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 SPECC1LQ69YQ0 1117 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 CCDC191Q8NCU4 936 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 TSPYL1Q9H0U9 437 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 ADAM21Q9UKJ8 722 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 SCN11AQ9UI33 1791 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 CAMTA1Q9Y6Y1 1673 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 MYO1BO43795 1136 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 PHKG2P15735 406 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 TXLNAP40222 546 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 TICAM2Q86XR7 235 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 LCMT1Q9UIC8 334 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 NFE2L3Q9Y4A8 694 aa24.38■■□□□ 1.49
USP48-205ENST00000421625 SLIT3O75094 1523 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms