RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 IGF2BP3O00425 579 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSBP3-206ENST00000420121 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-206ENST00000420121 TNNI2P48788 182 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 RASGRF1Q13972 1273 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 POLA2Q14181 598 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
SSBP3-206ENST00000420121 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-206ENST00000420121 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 DENND2AQ9ULE3 1009 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 RFX7Q2KHR2 1363 aa13.7□□□□□ -0.22
SSBP3-206ENST00000420121 GPR25O00155 361 aa13.69□□□□□ -0.22
SSBP3-206ENST00000420121 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
SSBP3-206ENST00000420121 IFNL1Q8IU54 200 aa13.69□□□□□ -0.22
SSBP3-206ENST00000420121 ELP3Q9H9T3 547 aa13.69□□□□□ -0.22
SSBP3-206ENST00000420121 GNL3LQ9NVN8 582 aaKnown RBP13.69□□□□□ -0.22
SSBP3-206ENST00000420121 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-206ENST00000420121 GAKO14976 1311 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 HTTP42858 3142 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-206ENST00000420121 CCDC85CA6NKD9 419 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
SSBP3-206ENST00000420121 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 INHBEP58166 350 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 NFIAQ12857 509 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 VGLL4Q14135 290 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-206ENST00000420121 CTU1Q7Z7A3 348 aaKnown RBP13.68□□□□□ -0.22
SSBP3-206ENST00000420121 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 ZNF384Q8TF68 577 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 MS4A4AQ96JQ5 239 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 PTPN18Q99952 460 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 FAM198AQ9UFP1 575 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 AKAP2Q9Y2D5 859 aa13.68□□□□□ -0.22
SSBP3-206ENST00000420121 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-206ENST00000420121 ZBTB7BO15156 539 aaPredicted RBP13.67□□□□□ -0.22
SSBP3-206ENST00000420121 MAP3K9P80192 1104 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 FAM151AQ8WW52 585 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 C1orf115Q9H7X2 142 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 MAST2Q6P0Q8 1798 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 ATRNL1Q5VV63 1379 aa13.67□□□□□ -0.22
SSBP3-206ENST00000420121 ALDH1A1P00352 501 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
SSBP3-206ENST00000420121 RGS19P49795 217 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
SSBP3-206ENST00000420121 PI16Q6UXB8 463 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
SSBP3-206ENST00000420121 PHIPQ8WWQ0 1821 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 PTPRFP10586 1907 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 SPDYE5A6NIY4 337 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 TCP10Q12799 353 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
SSBP3-206ENST00000420121 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
SSBP3-206ENST00000420121 NEUROD6Q96NK8 337 aa13.65□□□□□ -0.22
SSBP3-206ENST00000420121 ZSWIM8A7E2V4 1837 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 FKTNO75072 461 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 MCAMP43121 646 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 CAP1Q01518 475 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
SSBP3-206ENST00000420121 MIGA2Q7L4E1 593 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 SH3BP5LQ7L8J4 393 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 FTSJ3Q8IY81 847 aaKnown RBP13.64□□□□□ -0.23
SSBP3-206ENST00000420121 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
SSBP3-206ENST00000420121 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 IDI2Q9BXS1 227 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 GPR108Q9NPR9 543 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 ABCF2Q9UG63 623 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 ZNF112Q9UJU3 913 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
SSBP3-206ENST00000420121 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 WDHD1O75717 1129 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-206ENST00000420121 INPP5BP32019 993 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 MECOMQ03112 1051 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 CRHR2Q13324 411 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 SPATA5Q8NB90 893 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 PANK1Q8TE04 598 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 DDX4Q9NQI0 724 aaKnown RBP13.63□□□□□ -0.23
SSBP3-206ENST00000420121 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
SSBP3-206ENST00000420121 CSADQ9Y600 493 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 MROH7-TTC4A0A0A0MT08 1334 aa13.63□□□□□ -0.23
SSBP3-206ENST00000420121 RGS3P49796 1198 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 RHBDL3P58872 404 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 CEP85Q6P2H3 762 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 ERO1BQ86YB8 467 aa13.62□□□□□ -0.23
SSBP3-206ENST00000420121 DZIP1Q86YF9 867 aaKnown RBP13.62□□□□□ -0.23
SSBP3-206ENST00000420121 NSUN4Q96CB9 384 aaKnown RBP13.62□□□□□ -0.23
SSBP3-206ENST00000420121 HOOK2Q96ED9 719 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms