RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ERICH6Q7L0X2 663 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 DZIP1Q86YF9 867 aaKnown RBP16.29■□□□□ 0.2
TMEM248-203ENST00000418375 CSRNP1Q96S65 589 aa16.29■□□□□ 0.2
TMEM248-203ENST00000418375 TRPA1O75762 1119 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 HHIPL2Q6UWX4 724 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
TMEM248-203ENST00000418375 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
TMEM248-203ENST00000418375 ZDHHC15Q96MV8 337 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 SNRKQ9NRH2 765 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 RNF186Q9NXI6 227 aa16.28■□□□□ 0.2
TMEM248-203ENST00000418375 ZAP70P43403 619 aa16.27■□□□□ 0.2
TMEM248-203ENST00000418375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
TMEM248-203ENST00000418375 LRP2BPQ9P2M1 347 aa16.27■□□□□ 0.2
TMEM248-203ENST00000418375 PCDHAC2Q9Y5I4 1007 aa16.27■□□□□ 0.2
TMEM248-203ENST00000418375 MYH13Q9UKX3 1938 aa16.27■□□□□ 0.19
TMEM248-203ENST00000418375 IGSF3O75054 1194 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 TBC1D9Q6ZT07 1266 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 ARMC9Q7Z3E5 817 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
TMEM248-203ENST00000418375 CLRN2A0PK11 232 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
TMEM248-203ENST00000418375 ATP5JP18859 108 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 GSTO1P78417 241 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 PRKG1Q13976 671 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 MCOLN1Q9GZU1 580 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 TDRD3Q9H7E2 651 aaKnown RBP16.25■□□□□ 0.19
TMEM248-203ENST00000418375 VEZTQ9HBM0 779 aa16.25■□□□□ 0.19
TMEM248-203ENST00000418375 IGHDP01880 384 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 LDHCP07864 332 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 MECOMQ03112 1051 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 DGKZQ13574 1117 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 TTF1Q15361 905 aaPredicted RBP16.24■□□□□ 0.19
TMEM248-203ENST00000418375 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 APOBEC3HQ6NTF7 200 aaKnown RBP16.24■□□□□ 0.19
TMEM248-203ENST00000418375 SMC5Q8IY18 1101 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 ECHDC1Q9NTX5 307 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 TMOD2Q9NZR1 351 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
TMEM248-203ENST00000418375 DAGLAQ9Y4D2 1042 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
TMEM248-203ENST00000418375 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
TMEM248-203ENST00000418375 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
TMEM248-203ENST00000418375 FAM163AQ96GL9 167 aaPredicted RBP16.23■□□□□ 0.19
TMEM248-203ENST00000418375 BOLA2Q9H3K6 86 aa16.23■□□□□ 0.19
TMEM248-203ENST00000418375 PIH1D3Q9NQM4 214 aaKnown RBP16.23■□□□□ 0.19
TMEM248-203ENST00000418375 ANGEL1Q9UNK9 670 aaKnown RBP16.23■□□□□ 0.19
TMEM248-203ENST00000418375 GAKO14976 1311 aa16.22■□□□□ 0.19
TMEM248-203ENST00000418375 NEFLP07196 543 aa16.22■□□□□ 0.19
TMEM248-203ENST00000418375 TNNI2P48788 182 aa16.22■□□□□ 0.19
TMEM248-203ENST00000418375 LDLRAD1Q5T700 205 aa16.22■□□□□ 0.19
TMEM248-203ENST00000418375 NAA16Q6N069 864 aaPredicted RBP16.22■□□□□ 0.19
TMEM248-203ENST00000418375 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
TMEM248-203ENST00000418375 MROH7-TTC4A0A0A0MT08 1334 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 AOX1Q06278 1338 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
TMEM248-203ENST00000418375 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
TMEM248-203ENST00000418375 MAP3K12Q12852 859 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 MKRN3Q13064 507 aaKnown RBP16.21■□□□□ 0.19
TMEM248-203ENST00000418375 SUPT20HL1Q3ZLR7 823 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
TMEM248-203ENST00000418375 HAUS7Q99871 368 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
TMEM248-203ENST00000418375 FZD1Q9UP38 647 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
TMEM248-203ENST00000418375 TTC41PQ6P2S7 1318 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 TCP10L2B9ZVM9 353 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 GOLIM4O00461 696 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 ERC2O15083 957 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 BTDP43251 543 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 TM4SF4P48230 202 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 RASA3Q14644 834 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 CDC42EP5Q6NZY7 148 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 USP40Q9NVE5 1235 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 PAG1Q9NWQ8 432 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
TMEM248-203ENST00000418375 GPR75-ASB3A0A0A6YYF3 556 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 MX1P20591 662 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 MAP3K11Q16584 847 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 SLC10A4Q96EP9 437 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 AKAP11Q9UKA4 1901 aa16.19■□□□□ 0.18
TMEM248-203ENST00000418375 GLRX3O76003 335 aaKnown RBP16.18■□□□□ 0.18
TMEM248-203ENST00000418375 BAG3O95817 575 aa16.18■□□□□ 0.18
TMEM248-203ENST00000418375 MAP4K4O95819 1239 aaPredicted RBP16.18■□□□□ 0.18
TMEM248-203ENST00000418375 CACNB3P54284 484 aa16.18■□□□□ 0.18
TMEM248-203ENST00000418375 NUCB1Q02818 461 aa16.18■□□□□ 0.18
TMEM248-203ENST00000418375 NBPF12Q5TAG4 269 aaPredicted RBP16.18■□□□□ 0.18
TMEM248-203ENST00000418375 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
TMEM248-203ENST00000418375 FAM83AQ86UY5 434 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms