RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TRIOBPQ9H2D6 2365 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 HOXD10P28358 340 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 BCAMP50895 628 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
MDC1-202ENST00000416571 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
MDC1-202ENST00000416571 HHIPL2Q6UWX4 724 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 MIGA2Q7L4E1 593 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
MDC1-202ENST00000416571 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
MDC1-202ENST00000416571 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 BRCA2P51587 3418 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 UTYO14607 1347 aa12.58□□□□□ -0.4
MDC1-202ENST00000416571 ANP32CO43423 234 aa12.57□□□□□ -0.4
MDC1-202ENST00000416571 FMNL1O95466 1100 aaPredicted RBP12.57□□□□□ -0.4
MDC1-202ENST00000416571 PSMC4P43686 418 aa12.57□□□□□ -0.4
MDC1-202ENST00000416571 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
MDC1-202ENST00000416571 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
MDC1-202ENST00000416571 NKX2-3Q8TAU0 364 aa12.57□□□□□ -0.4
MDC1-202ENST00000416571 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
MDC1-202ENST00000416571 H0YGN5 161 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 PDHXO00330 501 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 SLC5A1P13866 664 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 INPP5BP32019 993 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 C17orf99Q6UX52 265 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 VGLL2Q8N8G2 317 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 FAM151AQ8WW52 585 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 DPF3Q92784 378 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
MDC1-202ENST00000416571 SRRDQ9UH36 339 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 KIF16BQ96L93 1317 aa12.56□□□□□ -0.4
MDC1-202ENST00000416571 GRK4P32298 578 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
MDC1-202ENST00000416571 UBXN2AP68543 259 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 TCP10Q12799 353 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 MTFR1Q15390 333 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 ANKRD44Q8N8A2 993 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 PARK7Q99497 189 aaKnown RBP12.55□□□□□ -0.4
MDC1-202ENST00000416571 MYPNQ86TC9 1320 aa12.55□□□□□ -0.4
MDC1-202ENST00000416571 OSBPP22059 807 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 LPIN2Q92539 896 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 HTATIP2Q9BUP3 242 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 CEP290O15078 2479 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 PTPRCP08575 1304 aa12.54□□□□□ -0.4
MDC1-202ENST00000416571 EYA2O00167 538 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
MDC1-202ENST00000416571 FGFR2P21802 821 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 FCGRTP55899 365 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 CDC42EP5Q6NZY7 148 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 FAM9BQ8IZU0 186 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 SHISA4Q96DD7 197 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 RNF208Q9H0X6 261 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
MDC1-202ENST00000416571 DAGLAQ9Y4D2 1042 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 DOCK2Q92608 1830 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 MGAMO43451 1857 aa12.53□□□□□ -0.4
MDC1-202ENST00000416571 GJB1P08034 283 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 CCL5P13501 91 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 CTGFP29279 349 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 GJA8P48165 433 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.41
MDC1-202ENST00000416571 MRPL50Q8N5N7 158 aaKnown RBP12.52□□□□□ -0.41
MDC1-202ENST00000416571 USP40Q9NVE5 1235 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 ZNF112Q9UJU3 913 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 NR2E3Q9Y5X4 410 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 ADGRA2Q96PE1 1338 aa12.52□□□□□ -0.41
MDC1-202ENST00000416571 CXCL11O14625 94 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 PRDX5P30044 214 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 PRKCZQ05513 592 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 NFIAQ12857 509 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 FASTKD5Q7L8L6 764 aaKnown RBP12.51□□□□□ -0.41
MDC1-202ENST00000416571 SLAIN1Q8ND83 568 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 PICK1Q9NRD5 415 aa12.51□□□□□ -0.41
MDC1-202ENST00000416571 CYP2C8P10632 490 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
MDC1-202ENST00000416571 U2AF1L4Q8WU68 220 aaKnown RBP12.5□□□□□ -0.41
MDC1-202ENST00000416571 SIL1Q9H173 461 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 CEP126Q9P2H0 1117 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
MDC1-202ENST00000416571 DENND2AQ9ULE3 1009 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 ZHX2Q9Y6X8 837 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 UNC80Q8N2C7 3258 aa12.5□□□□□ -0.41
MDC1-202ENST00000416571 MYH2Q9UKX2 1941 aa12.49□□□□□ -0.41
MDC1-202ENST00000416571 FARP2O94887 1054 aaPredicted RBP12.49□□□□□ -0.41
MDC1-202ENST00000416571 BCRP11274 1271 aa12.49□□□□□ -0.41
MDC1-202ENST00000416571 MOGSQ13724 837 aa12.49□□□□□ -0.41
MDC1-202ENST00000416571 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
MDC1-202ENST00000416571 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
MDC1-202ENST00000416571 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
MDC1-202ENST00000416571 FAM198AQ9UFP1 575 aa12.49□□□□□ -0.41
MDC1-202ENST00000416571 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
MDC1-202ENST00000416571 SALL1Q9NSC2 1324 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms