RNA–Protein interactions for RNA: ENST00000415338.1

AC239798.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC239798.2, Length 3,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239798.2-201ENST00000415338 CABP5Q9NP86 173 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 IGSF3O75054 1194 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 CDC27P30260 824 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 PNOCQ13519 176 aa16.06■□□□□ 0.16
AC239798.2-201ENST00000415338 RGPD5Q99666 1765 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 STX17P56962 302 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 NR5A1Q13285 461 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 LMTK3Q96Q04 1460 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 UBN2Q6ZU65 1347 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 VPS54Q9P1Q0 977 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF219Q9P2Y4 722 aaPredicted RBP16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ANTXR2P58335 489 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ERFEQ4G0M1 354 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 GRAMD1CQ8IYS0 662 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 VAT1LQ9HCJ6 419 aa16.05■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 DIS3L2Q8IYB7 885 aaKnown RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 TRMT44Q8IYL2 757 aaKnown RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 JMYQ8N9B5 988 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 PLIN2Q99541 437 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 MAGEB6P1A0A0J9YX57 407 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
AC239798.2-201ENST00000415338 PFKFB1P16118 471 aa16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 KCNG4Q8TDN1 519 aa16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 CACTINQ8WUQ7 758 aaKnown RBP16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 GPR108Q9NPR9 543 aa16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 GUCY1A2P33402 732 aa16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 V9GY48 417 aaPredicted RBP16.03■□□□□ 0.16
AC239798.2-201ENST00000415338 TSPY2A6NKD2 308 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 USP5P45974 858 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 KCNB2Q92953 911 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 DHX58Q96C10 678 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 OVOS2A0A0G2JMS6 1433 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 CAMTA1Q9Y6Y1 1673 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 RRP9O43818 475 aaKnown RBP16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 SETDB2Q96T68 719 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.16
AC239798.2-201ENST00000415338 G3V3G9 751 aa16.02■□□□□ 0.15
AC239798.2-201ENST00000415338 IFIT1BQ5T764 474 aaKnown RBP16.02■□□□□ 0.15
AC239798.2-201ENST00000415338 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.15
AC239798.2-201ENST00000415338 MAPK8IP1Q9UQF2 711 aa16.02■□□□□ 0.15
AC239798.2-201ENST00000415338 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 STRBPQ96SI9 672 aaKnown RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 SAP30BPQ9UHR5 308 aaKnown RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 MED1Q15648 1581 aaPredicted RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 USP17L21D6R901 530 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 CTAGE5O15320 804 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 ITPK1Q13572 414 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 ZNF174Q15697 407 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 PTF1AQ7RTS3 328 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 MB21D2Q8IYB1 491 aaPredicted RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 RCOR1Q9UKL0 485 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 NMT2O60551 498 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 CASP1P29466 404 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 PTPN14Q15678 1187 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 LINC00301Q8NCQ3 95 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 MCM9Q9NXL9 1143 aa16.01■□□□□ 0.15
AC239798.2-201ENST00000415338 ELP1O95163 1332 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
AC239798.2-201ENST00000415338 CACNA1FO60840 1977 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
AC239798.2-201ENST00000415338 ATP1A3P13637 1013 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
AC239798.2-201ENST00000415338 GPIHBP1Q8IV16 184 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 SMARCC2Q8TAQ2 1214 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
AC239798.2-201ENST00000415338 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
AC239798.2-201ENST00000415338 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
AC239798.2-201ENST00000415338 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 FOXN1O15353 648 aa15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 XBP1P17861 261 aa15.99■□□□□ 0.15
AC239798.2-201ENST00000415338 CDC25AP30304 524 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms