RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 BTDP43251 543 aa37.03■■■■□ 3.52
CSNK1E-206ENST00000413574 MAP1SQ66K74 1059 aaPredicted RBP37.01■■■■□ 3.52
CSNK1E-206ENST00000413574 PGAP2Q9UHJ9 254 aa37.01■■■■□ 3.52
CSNK1E-206ENST00000413574 GPR75-ASB3A0A0A6YYF3 556 aa37■■■■□ 3.51
CSNK1E-206ENST00000413574 IGSF3O75054 1194 aa37■■■■□ 3.51
CSNK1E-206ENST00000413574 MIGA1Q8NAN2 632 aa37■■■■□ 3.51
CSNK1E-206ENST00000413574 ZC3H15Q8WU90 426 aaKnown RBP37■■■■□ 3.51
CSNK1E-206ENST00000413574 AATFQ9NY61 560 aaKnown RBP eCLIP37■■■■□ 3.51
CSNK1E-206ENST00000413574 MYO1BO43795 1136 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 CACNB3P54284 484 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 CDC42EP5Q6NZY7 148 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 CNTROBQ8N137 903 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 ZNF70Q9UC06 446 aaPredicted RBP36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 SPDYE2Q495Y8 402 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 VEZTQ9HBM0 779 aa36.99■■■■□ 3.51
CSNK1E-206ENST00000413574 DYNLL1P63167 89 aaKnown RBP36.98■■■■□ 3.51
CSNK1E-206ENST00000413574 ZSCAN25Q6NSZ9 544 aa36.98■■■■□ 3.51
CSNK1E-206ENST00000413574 USP40Q9NVE5 1235 aa36.98■■■■□ 3.51
CSNK1E-206ENST00000413574 SDSP20132 328 aa36.97■■■■□ 3.51
CSNK1E-206ENST00000413574 RNF113AO15541 343 aaKnown RBP36.96■■■■□ 3.51
CSNK1E-206ENST00000413574 DCPSQ96C86 337 aaKnown RBP36.96■■■■□ 3.51
CSNK1E-206ENST00000413574 TOMM70O94826 608 aa36.96■■■■□ 3.51
CSNK1E-206ENST00000413574 UBE3CQ15386 1083 aa36.96■■■■□ 3.51
CSNK1E-206ENST00000413574 CHADLQ6NUI6 762 aa36.96■■■■□ 3.51
CSNK1E-206ENST00000413574 RHBDL3P58872 404 aa36.95■■■■□ 3.51
CSNK1E-206ENST00000413574 DLK2Q6UY11 383 aa36.95■■■■□ 3.51
CSNK1E-206ENST00000413574 CDK5RAP2Q96SN8 1893 aa36.94■■■■□ 3.5
CSNK1E-206ENST00000413574 SH3RF3Q8TEJ3 882 aaPredicted RBP36.94■■■■□ 3.5
CSNK1E-206ENST00000413574 NOL10Q9BSC4 688 aaKnown RBP36.94■■■■□ 3.5
CSNK1E-206ENST00000413574 GLIS2Q9BZE0 524 aaPredicted RBP36.94■■■■□ 3.5
CSNK1E-206ENST00000413574 TMED8Q6PL24 325 aaPredicted RBP36.93■■■■□ 3.5
CSNK1E-206ENST00000413574 TCP10L2B9ZVM9 353 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 ADM5C9JUS6 153 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 BAG3O95817 575 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 PPP4CP60510 307 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 PUS7LQ9H0K6 701 aaKnown RBP36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 PITPNM2Q9BZ72 1349 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 ZFYP08048 801 aaPredicted RBP36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 KRT26Q7Z3Y9 468 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 USP48Q86UV5 1035 aa36.92■■■■□ 3.5
CSNK1E-206ENST00000413574 NFIAQ12857 509 aa36.91■■■■□ 3.5
CSNK1E-206ENST00000413574 RBM46Q8TBY0 533 aaKnown RBP36.91■■■■□ 3.5
CSNK1E-206ENST00000413574 OSBP2Q969R2 916 aa36.91■■■■□ 3.5
CSNK1E-206ENST00000413574 RIOK1Q9BRS2 568 aaKnown RBP36.91■■■■□ 3.5
CSNK1E-206ENST00000413574 MAGEB6P1A0A0J9YX57 407 aa36.9■■■■□ 3.5
CSNK1E-206ENST00000413574 SEC62Q99442 399 aaKnown RBP36.9■■■■□ 3.5
CSNK1E-206ENST00000413574 LRRFIP1Q32MZ4 808 aaKnown RBP36.89■■■■□ 3.5
CSNK1E-206ENST00000413574 APOBEC3FQ8IUX4 373 aaKnown RBP36.89■■■■□ 3.5
CSNK1E-206ENST00000413574 SULF1Q8IWU6 871 aa36.89■■■■□ 3.5
CSNK1E-206ENST00000413574 APPBP2Q92624 585 aa36.89■■■■□ 3.5
CSNK1E-206ENST00000413574 TMOD2Q9NZR1 351 aa36.89■■■■□ 3.5
CSNK1E-206ENST00000413574 WDHD1O75717 1129 aaPredicted RBP36.88■■■■□ 3.5
CSNK1E-206ENST00000413574 FMR1Q06787 632 aaKnown RBP eCLIP36.88■■■■□ 3.53e-11■■■■■ 66.2
CSNK1E-206ENST00000413574 LCORLQ8N3X6 602 aa36.88■■■■□ 3.5
CSNK1E-206ENST00000413574 SMC1BQ8NDV3 1235 aa36.88■■■■□ 3.5
CSNK1E-206ENST00000413574 ARMT1Q9H993 441 aa36.88■■■■□ 3.5
CSNK1E-206ENST00000413574 TRAF5O00463 557 aa36.88■■■■□ 3.49
CSNK1E-206ENST00000413574 MBD4O95243 580 aa36.88■■■■□ 3.49
CSNK1E-206ENST00000413574 PRAMEF18Q5VWM3 479 aa36.88■■■■□ 3.49
CSNK1E-206ENST00000413574 CDC37L1Q7L3B6 337 aa36.88■■■■□ 3.49
CSNK1E-206ENST00000413574 TEX11Q8IYF3 940 aa36.88■■■■□ 3.49
CSNK1E-206ENST00000413574 ZMYM1Q5SVZ6 1142 aa36.87■■■■□ 3.49
CSNK1E-206ENST00000413574 FAM227BQ96M60 508 aa36.87■■■■□ 3.49
CSNK1E-206ENST00000413574 CNTNAP1P78357 1384 aa36.87■■■■□ 3.49
CSNK1E-206ENST00000413574 FOCADQ5VW36 1801 aa36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 M0R2C6 588 aa36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 TCP10Q12799 353 aa36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 DEFB129Q9H1M3 183 aa36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 DDX4Q9NQI0 724 aaKnown RBP36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 FAM198AQ9UFP1 575 aa36.86■■■■□ 3.49
CSNK1E-206ENST00000413574 ITGBL1O95965 494 aaPredicted RBP36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 PICALMQ13492 652 aa36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 RASA3Q14644 834 aa36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 BMP2KLQ5H9B9 411 aa36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 RFX7Q2KHR2 1363 aa36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 PLCG2P16885 1265 aa36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 NMIQ13287 307 aaPredicted RBP36.85■■■■□ 3.49
CSNK1E-206ENST00000413574 ZFPM1Q8IX07 1006 aa36.84■■■■□ 3.49
CSNK1E-206ENST00000413574 TGFBRAP1Q8WUH2 860 aa36.84■■■■□ 3.49
CSNK1E-206ENST00000413574 AIDAQ96BJ3 306 aa36.84■■■■□ 3.49
CSNK1E-206ENST00000413574 IDI2Q9BXS1 227 aa36.84■■■■□ 3.49
CSNK1E-206ENST00000413574 TMEM39BQ9GZU3 492 aa36.84■■■■□ 3.49
CSNK1E-206ENST00000413574 A0A0D9SFI3 127 aa36.83■■■■□ 3.49
CSNK1E-206ENST00000413574 FKBP1CQ5VVH2 108 aa36.83■■■■□ 3.49
CSNK1E-206ENST00000413574 TNFAIP1Q13829 316 aa36.82■■■■□ 3.49
CSNK1E-206ENST00000413574 CDAN1Q8IWY9 1227 aa36.82■■■■□ 3.49
CSNK1E-206ENST00000413574 CCDC129Q6ZRS4 1044 aa36.81■■■■□ 3.48
CSNK1E-206ENST00000413574 PRKAB2O43741 272 aa36.81■■■■□ 3.48
CSNK1E-206ENST00000413574 MAPKAPK5Q8IW41 473 aa36.81■■■■□ 3.48
CSNK1E-206ENST00000413574 DIAPH3Q9NSV4 1193 aa36.81■■■■□ 3.48
CSNK1E-206ENST00000413574 GPAA1O43292 621 aa36.8■■■■□ 3.48
CSNK1E-206ENST00000413574 TNNI2P48788 182 aa36.8■■■■□ 3.48
CSNK1E-206ENST00000413574 TICAM2Q86XR7 235 aa36.8■■■■□ 3.48
CSNK1E-206ENST00000413574 CERS3Q8IU89 383 aa36.8■■■■□ 3.48
CSNK1E-206ENST00000413574 CWC27Q6UX04 472 aaKnown RBP36.79■■■■□ 3.48
CSNK1E-206ENST00000413574 FAM83AQ86UY5 434 aa36.79■■■■□ 3.48
CSNK1E-206ENST00000413574 SDR42E1Q8WUS8 393 aa36.79■■■■□ 3.48
CSNK1E-206ENST00000413574 CDCA5Q96FF9 252 aa36.79■■■■□ 3.48
CSNK1E-206ENST00000413574 STRBPQ96SI9 672 aaKnown RBP36.79■■■■□ 3.48
CSNK1E-206ENST00000413574 FSTL1Q12841 308 aa36.78■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms