RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 VPS37AQ8NEZ2 397 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 VTI1AQ96AJ9 217 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 OSBPL9Q96SU4 736 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.46
HERC4-205ENST00000412272 ZCWPW1Q9H0M4 648 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 ZBTB40Q9NUA8 1239 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 KLHL42Q9P2K6 505 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 MAST1Q9Y2H9 1570 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 KIF24Q5T7B8 1368 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 NPHP1O15259 732 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 ATP9BO43861 1147 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 PTGS1P23219 599 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 ARHGAP29Q52LW3 1261 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 CAPRIN2Q6IMN6 1127 aaKnown RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 DNAI1Q9UI46 699 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 PHF24Q9UPV7 400 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 ABCC11Q96J66 1382 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 MYO1FO00160 1098 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 CTAG1AP78358 180 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 PKP1Q13835 747 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 FOXD4L1Q9NU39 408 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 KLF15Q9UIH9 416 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 SETD1AO15047 1707 aaKnown RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 YTHDC2Q9H6S0 1430 aaKnown RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 ERICH2A1L162 156 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 FUT4P22083 530 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 EMC10Q5UCC4 262 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 CC2D1AQ6P1N0 951 aaPredicted RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 MAGEC3Q8TD91 643 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 SPOCK3Q9BQ16 436 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 OXCT2Q9BYC2 517 aaPredicted RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 PAPOLBQ9NRJ5 636 aaKnown RBP5.94□□□□□ -1.46
HERC4-205ENST00000412272 SEL1LQ9UBV2 794 aa5.94□□□□□ -1.46
HERC4-205ENST00000412272 PPIP5K1Q6PFW1 1433 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 GOLGA6L19H0YKK7 550 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 PHEXP78562 749 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 TMF1P82094 1093 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 LRMPQ12912 555 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 PABPC1LQ4VXU2 614 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 CCDC92Q53HC0 331 aaPredicted RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 AGAP9Q5VTM2 703 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 ZSCAN25Q6NSZ9 544 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 ATF7IPQ6VMQ6 1270 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 DZIP1LQ8IYY4 767 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 JAKMIP2Q96AA8 810 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 FAM169AQ9Y6X4 670 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 ST18O60284 1047 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 FSBPO95073 299 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 FGFR1OPO95684 399 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 RPSAP08865 295 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 FERP16591 822 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 PRKAR2BP31323 418 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 RCN1Q15293 331 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 GNPTABQ3T906 1256 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 SARM1Q6SZW1 724 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 RBM43Q6ZSC3 357 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 GALNT15Q8N3T1 639 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 FNBP4Q8N3X1 1017 aaPredicted RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 RPAP3Q9H6T3 665 aaPredicted RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 ARGLU1Q9NWB6 273 aaPredicted RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 IFT57Q9NWB7 429 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 CORO1CQ9ULV4 474 aaPredicted RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 DMRT2Q9Y5R5 561 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 SSH2Q76I76 1423 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 TMEM110-MUSTN1A8MSY1 372 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 NDUFB5O43674 189 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 CUL4BQ13620 913 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 FAM228AQ86W67 206 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 EXOC1Q9NV70 894 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 MAP3K20Q9NYL2 800 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 ZMAT5Q9UDW3 170 aaKnown RBP5.93□□□□□ -1.46
HERC4-205ENST00000412272 CROTQ9UKG9 612 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 KNDC1Q76NI1 1749 aa5.93□□□□□ -1.46
HERC4-205ENST00000412272 PPFIA3O75145 1194 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 GIGYF1O75420 1035 aaPredicted RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 GFPT2O94808 682 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 LINGO3P0C6S8 592 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 FOSL1P15407 271 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 TPD52L1Q16890 204 aaPredicted RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.92□□□□□ -1.46
HERC4-205ENST00000412272 MIGA1Q8NAN2 632 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 RSRC1Q96IZ7 334 aaKnown RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 UBE2OQ9C0C9 1292 aaKnown RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 BZW2Q9Y6E2 419 aaKnown RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 PTCH1Q13635 1447 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 ADGRL3Q9HAR2 1447 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 MSH6P52701 1360 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 TTC21BQ7Z4L5 1316 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 BICDL2A1A5D9 508 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 MAP2K7O14733 419 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 UBE2HP62256 183 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 POU5F1Q01860 360 aaKnown RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 ACTN3Q08043 901 aaPredicted RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 NEK10Q6ZWH5 1172 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 BZW1Q7L1Q6 419 aaKnown RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 THEMISQ8N1K5 641 aaPredicted RBP5.92□□□□□ -1.46
HERC4-205ENST00000412272 CCDC82Q8N4S0 544 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 YIPF3Q9GZM5 350 aa5.92□□□□□ -1.46
HERC4-205ENST00000412272 CCDC68Q9H2F9 335 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms