RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 TMOD2Q9NZR1 351 aa11.33□□□□□ -0.6
BRCC3-207ENST00000411985 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
BRCC3-207ENST00000411985 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
BRCC3-207ENST00000411985 SIPA1L1O43166 1804 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-207ENST00000411985 UNCXA6NJT0 531 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 ARID4AP29374 1257 aaPredicted RBP11.32□□□□□ -0.6
BRCC3-207ENST00000411985 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
BRCC3-207ENST00000411985 CACNB3P54284 484 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 LDLRAD1Q5T700 205 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 GORABQ5T7V8 394 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 APOBEC3HQ6NTF7 200 aaKnown RBP11.32□□□□□ -0.6
BRCC3-207ENST00000411985 TEPSINQ96N21 525 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 GPR108Q9NPR9 543 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 COG6Q9Y2V7 657 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
BRCC3-207ENST00000411985 DAGLAQ9Y4D2 1042 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
BRCC3-207ENST00000411985 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-207ENST00000411985 FKBP1CQ5VVH2 108 aa11.31□□□□□ -0.6
BRCC3-207ENST00000411985 FAM83AQ86UY5 434 aa11.31□□□□□ -0.6
BRCC3-207ENST00000411985 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
BRCC3-207ENST00000411985 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
BRCC3-207ENST00000411985 ABCF2Q9UG63 623 aa11.31□□□□□ -0.6
BRCC3-207ENST00000411985 MGAMO43451 1857 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
BRCC3-207ENST00000411985 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
BRCC3-207ENST00000411985 CDAN1Q8IWY9 1227 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 SLF2Q8IX21 1173 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 SPATA5Q8NB90 893 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 CHMP4BQ9H444 224 aaKnown RBP11.3□□□□□ -0.6
BRCC3-207ENST00000411985 RNF186Q9NXI6 227 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 GAKO14976 1311 aa11.3□□□□□ -0.6
BRCC3-207ENST00000411985 TRPA1O75762 1119 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 ZBTB48P10074 688 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-207ENST00000411985 MCAMP43121 646 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 SREBF2Q12772 1141 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 CCDC158Q5M9N0 1113 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 TTC39AQ5SRH9 613 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 CDC42EP5Q6NZY7 148 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 PI16Q6UXB8 463 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 HOOK2Q96ED9 719 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 SLC10A4Q96EP9 437 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 CLMNQ96JQ2 1002 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 DBNDD2Q9BQY9 259 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 ZBTB40Q9NUA8 1239 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
BRCC3-207ENST00000411985 EXOC6BQ9Y2D4 811 aa11.29□□□□□ -0.6
BRCC3-207ENST00000411985 TM4SF4P48230 202 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 MECOMQ03112 1051 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 PDE3AQ14432 1141 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 RPAP2Q8IXW5 612 aaPredicted RBP11.28□□□□□ -0.6
BRCC3-207ENST00000411985 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 WNK4Q96J92 1243 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 USP40Q9NVE5 1235 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 DDX60LQ5H9U9 1706 aaKnown RBP11.28□□□□□ -0.6
BRCC3-207ENST00000411985 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
BRCC3-207ENST00000411985 BAZ2AQ9UIF9 1905 aaKnown RBP11.27□□□□□ -0.6
BRCC3-207ENST00000411985 MANSC4A6NHS7 340 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 HMMRO75330 724 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 TCP10Q12799 353 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 NFIAQ12857 509 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 C20orf194Q5TEA3 1177 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.61
BRCC3-207ENST00000411985 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 FAM163AQ96GL9 167 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 CCDC8Q9H0W5 538 aaPredicted RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.61
BRCC3-207ENST00000411985 LOC285556D6RIA3 1793 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 ZSWIM8A7E2V4 1837 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 BTDP43251 543 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 INHBEP58166 350 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 GSTO1P78417 241 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 VGLL4Q14135 290 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 POTEHQ6S545 545 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.26□□□□□ -0.61
BRCC3-207ENST00000411985 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
BRCC3-207ENST00000411985 OPTNQ96CV9 577 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 IDI2Q9BXS1 227 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 ELP3Q9H9T3 547 aa11.26□□□□□ -0.61
BRCC3-207ENST00000411985 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms