RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 DYMQ7RTS9 669 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 PDZD3Q86UT5 571 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 SULF2Q8IWU5 870 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 SHKBP1Q8TBC3 707 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
RNU4-55P-201ENST00000410731 PRR19A6NJB7 356 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 NME2P22392 152 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 FGD1P98174 961 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 KIF4BQ2VIQ3 1234 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 MFSD14AQ96MC6 490 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 FRMD6Q96NE9 622 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 NECAB3Q96P71 396 aaPredicted RBP6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 CEP44Q9C0F1 390 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 ACSS3Q9H6R3 686 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 FAM8A1Q9UBU6 413 aa6.3□□□□□ -1.4
RNU4-55P-201ENST00000410731 ANKRD33BA6NCL7 494 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 TMPRSS2O15393 492 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 ZNF862O60290 1169 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 COBLO75128 1261 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 LIG1P18858 919 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 RAB6AP20340 208 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 ARNTP27540 789 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 SSTR4P31391 388 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 MAP7Q14244 749 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 NFKBIBQ15653 356 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 TPTE2Q6XPS3 522 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 GIMAP7Q8NHV1 300 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 STK35Q8TDR2 534 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 WDR89Q96FK6 387 aaPredicted RBP6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 EMILIN2Q9BXX0 1053 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 ZC3H12CQ9C0D7 883 aaKnown RBP6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 SEMA6CQ9H3T2 930 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 CRIM1Q9NZV1 1036 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 PRKAG2Q9UGJ0 569 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 PPP1R9AQ9ULJ8 1098 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
RNU4-55P-201ENST00000410731 WDR64B1ANS9 1081 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 ENC1O14682 589 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 USP17L7P0C7H9 530 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 SLFN14P0C7P3 912 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 GNA15P30679 374 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 GRIK1P39086 918 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 ASPAP45381 313 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 ID3Q02535 119 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 ZNF252P-AS1Q0IIN9 211 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 NBPF11Q86T75 865 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 KCNB2Q92953 911 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 PCMTD2Q9NV79 361 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
RNU4-55P-201ENST00000410731 F13BP05160 661 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 NFICP08651 508 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 EAPPQ56P03 285 aaPredicted RBP6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 DNAJC14Q6Y2X3 702 aaPredicted RBP6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 ZAR1Q86SH2 424 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 NPAS4Q8IUM7 802 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 FBXL6Q8N531 539 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 GATA6Q92908 595 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 METTL22Q9BUU2 404 aaPredicted RBP6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 ATG3Q9NT62 314 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 CACNA2D2Q9NY47 1150 aa6.27□□□□□ -1.41
RNU4-55P-201ENST00000410731 FBXO24O75426 580 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 PAGE1O75459 146 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 MED26O95402 600 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 SPINK2P20155 84 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 ADMP35318 185 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 MAP1SQ66K74 1059 aaPredicted RBP6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 SEZ6L2Q6UXD5 910 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 OSBPL1AQ9BXW6 950 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 PIM2Q9P1W9 311 aa6.26□□□□□ -1.41
RNU4-55P-201ENST00000410731 BMP6P22004 513 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 EIF4BP23588 611 aaKnown RBP6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 DUSP9Q99956 384 aaKnown RBP6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 CBX8Q9HC52 389 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 DISC1Q9NRI5 854 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 DAGLAQ9Y4D2 1042 aa6.25□□□□□ -1.41
RNU4-55P-201ENST00000410731 TRIM37O94972 964 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 CELA3AP09093 270 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 FOSL1P15407 271 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 ZC3H12AQ5D1E8 599 aaKnown RBP6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 LLGL2Q6P1M3 1020 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 DTX1Q86Y01 620 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 SHISA5Q8N114 240 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 GPBAR1Q8TDU6 330 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 C1GALT1Q9NS00 363 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 TTF2Q9UNY4 1162 aaKnown RBP6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 LEMD3Q9Y2U8 911 aa6.24□□□□□ -1.41
RNU4-55P-201ENST00000410731 FAM170BA6NMN3 283 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 DYNC1LI2O43237 492 aaPredicted RBP6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 ERVK-24P63145 666 aa6.23□□□□□ -1.41
RNU4-55P-201ENST00000410731 CYP27A1Q02318 531 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms