RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MTHFSDQ2M296 383 aaKnown RBP19.86■□□□□ 0.77
SMPD4-202ENST00000409031 MICAL1Q8TDZ2 1067 aa19.86■□□□□ 0.77
SMPD4-202ENST00000409031 ESR2Q92731 530 aa19.86■□□□□ 0.77
SMPD4-202ENST00000409031 CEP63Q96MT8 703 aa19.86■□□□□ 0.77
SMPD4-202ENST00000409031 PAIP2Q9BPZ3 127 aaKnown RBP19.86■□□□□ 0.77
SMPD4-202ENST00000409031 NCOA5Q9HCD5 579 aaKnown RBP19.86■□□□□ 0.77
SMPD4-202ENST00000409031 ANKRD18BA2A2Z9 1011 aa19.86■□□□□ 0.77
SMPD4-202ENST00000409031 POLR2DO15514 142 aaKnown RBP19.86■□□□□ 0.77
SMPD4-202ENST00000409031 ALDH3A1P30838 453 aa19.86■□□□□ 0.77
SMPD4-202ENST00000409031 ATP5J2-PTCD1G3V325 749 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
SMPD4-202ENST00000409031 UQCRFS1P1P0C7P4 283 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 POSTNQ15063 836 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 LDHAL6AQ6ZMR3 332 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 DESI2Q9BSY9 194 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 AP1ARQ63HQ0 302 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 MCTP2Q6DN12 878 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 INTS8Q75QN2 995 aaKnown RBP19.85■□□□□ 0.77
SMPD4-202ENST00000409031 TPCN1Q9ULQ1 816 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 FAN1Q9Y2M0 1017 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 ZBTB16Q05516 673 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 RAD51AP2Q09MP3 1159 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 ZNF76P36508 570 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 IRX5P78411 483 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-202ENST00000409031 TSNAXIP1Q2TAA8 658 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 GDAP1L1Q96MZ0 367 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 TSKSQ9UJT2 592 aa19.85■□□□□ 0.77
SMPD4-202ENST00000409031 STAMBPO95630 424 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 ADGRL2O95490 1459 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
SMPD4-202ENST00000409031 KRT13P13646 458 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 MYSM1Q5VVJ2 828 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 MMS22LQ6ZRQ5 1243 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 NEDD9Q14511 834 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 ZNF622Q969S3 477 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMPD4-202ENST00000409031 PARD6BQ9BYG5 372 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 CTNND2Q9UQB3 1225 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 ATF3P18847 181 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 GBP1P32455 592 aa19.84■□□□□ 0.77
SMPD4-202ENST00000409031 CALML3P27482 149 aa19.83■□□□□ 0.77
SMPD4-202ENST00000409031 KRT2P35908 639 aa19.83■□□□□ 0.77
SMPD4-202ENST00000409031 NOX5Q96PH1 765 aa19.83■□□□□ 0.77
SMPD4-202ENST00000409031 HAUS4Q9H6D7 363 aa19.83■□□□□ 0.77
SMPD4-202ENST00000409031 ADAM21Q9UKJ8 722 aa19.83■□□□□ 0.77
SMPD4-202ENST00000409031 SMIM23A6NLE4 172 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 KMT5BQ4FZB7 885 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 CFAP221Q4G0U5 840 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 CACNA2D3Q8IZS8 1091 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 WDR66Q8TBY9 1149 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 VCXQ9H320 206 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 LMBR1LQ6UX01 489 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.76
SMPD4-202ENST00000409031 STAP2Q9UGK3 403 aa19.83■□□□□ 0.76
SMPD4-202ENST00000409031 A0A1W2PQ27 194 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 A0A1W2PQ64 194 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 A0A1W2PQD8 194 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 CMA1P23946 247 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 MTMR3Q13615 1198 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 OTUD7BQ6GQQ9 843 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 PFKFB1P16118 471 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 ATP5DP30049 168 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 APBA1Q02410 837 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 E2F4Q16254 413 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 SPTY2D1Q68D10 685 aaPredicted RBP19.82■□□□□ 0.76
SMPD4-202ENST00000409031 TBC1D5Q92609 795 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 FEZ2Q9UHY8 353 aaPredicted RBP19.82■□□□□ 0.76
SMPD4-202ENST00000409031 PAK1Q13153 545 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 CAVIN4Q5BKX8 364 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 SMC6Q96SB8 1091 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 KDM5CP41229 1560 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 STARD3NLO95772 234 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 SEC62Q99442 399 aaKnown RBP19.82■□□□□ 0.76
SMPD4-202ENST00000409031 KCNK9Q9NPC2 374 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 NKIRAS1Q9NYS0 192 aa19.82■□□□□ 0.76
SMPD4-202ENST00000409031 CCDC160A6NGH7 325 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 IKBKBO14920 756 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 ARID5AQ03989 594 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 SNCBQ16143 134 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 SARM1Q6SZW1 724 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 NOC4LQ9BVI4 516 aaKnown RBP19.81■□□□□ 0.76
SMPD4-202ENST00000409031 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 SLC9C2Q5TAH2 1124 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 OR8K1Q8NGG5 319 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 MYO1AQ9UBC5 1043 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 KIAA0232Q92628 1395 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 RNF40O75150 1001 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 CCDC38Q502W7 563 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 KAT14Q9H8E8 782 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.81■□□□□ 0.76
SMPD4-202ENST00000409031 IKBKGQ9Y6K9 419 aa19.81■□□□□ 0.76
SMPD4-202ENST00000409031 IFIT1BQ5T764 474 aaKnown RBP19.8■□□□□ 0.76
SMPD4-202ENST00000409031 NAP1L3Q99457 506 aaPredicted RBP19.8■□□□□ 0.76
SMPD4-202ENST00000409031 SPATS2LQ9NUQ6 558 aaKnown RBP19.8■□□□□ 0.76
SMPD4-202ENST00000409031 FANCLQ9NW38 375 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 PTPRTO14522 1441 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 MAGEA1P43355 309 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 PPANQ9NQ55 473 aaKnown RBP19.8■□□□□ 0.76
SMPD4-202ENST00000409031 KDM5BQ9UGL1 1544 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms