RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ARFGAP3Q9NP61 516 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 A0A1W2PQ27 194 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 A0A1W2PQ64 194 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 A0A1W2PQD8 194 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 BTBD18B2RXH4 712 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 IFIT3O14879 490 aaKnown RBP10.53□□□□□ -0.72
HPS4-203ENST00000402105 CCP110O43303 1012 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 CDC27P30260 824 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 GRIN1Q05586 938 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 KIF4BQ2VIQ3 1234 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 DHX58Q96C10 678 aa10.53□□□□□ -0.72
HPS4-203ENST00000402105 SAMSN1Q9NSI8 373 aaKnown RBP10.53□□□□□ -0.72
HPS4-203ENST00000402105 ANKRD65E5RJM6 399 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 PHKG2P15735 406 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 ATL3Q6DD88 541 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 BRAPQ7Z569 592 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.72
HPS4-203ENST00000402105 CCDC102AQ96A19 550 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 POLR3EQ9NVU0 708 aa10.52□□□□□ -0.72
HPS4-203ENST00000402105 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 GPS2Q13227 327 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
HPS4-203ENST00000402105 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
HPS4-203ENST00000402105 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
HPS4-203ENST00000402105 NKX2-3Q8TAU0 364 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 GDAP1L1Q96MZ0 367 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 PARD6BQ9BYG5 372 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 VPS18Q9P253 973 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 SERTAD1Q9UHV2 236 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 FAM208AQ9UK61 1670 aaKnown RBP10.52□□□□□ -0.73
HPS4-203ENST00000402105 A0A0U1RQJ8 604 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 SOWAHDA6NJG2 315 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 SNAP23O00161 211 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 ZBTB43O43298 467 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 H2AFXP16104 143 aaPredicted RBP10.52□□□□□ -0.73
HPS4-203ENST00000402105 GTF2E1P29083 439 aaPredicted RBP10.52□□□□□ -0.73
HPS4-203ENST00000402105 SLC39A14Q15043 492 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 LDHAL6AQ6ZMR3 332 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 PPFIBP1Q86W92 1011 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 CCDC191Q8NCU4 936 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 PLBD2Q8NHP8 589 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 ATRIPQ8WXE1 791 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 HPS5Q9UPZ3 1129 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 UTYO14607 1347 aa10.52□□□□□ -0.73
HPS4-203ENST00000402105 ANTXR2P58335 489 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 FOXO4P98177 505 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 ZNF569Q5MCW4 686 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 CYB5R4Q7L1T6 521 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 FOXP4Q8IVH2 680 aaPredicted RBP10.51□□□□□ -0.73
HPS4-203ENST00000402105 IQSEC3Q9UPP2 1182 aaPredicted RBP10.51□□□□□ -0.73
HPS4-203ENST00000402105 MAPK8IP1Q9UQF2 711 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 AKAP12Q02952 1782 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 PRR29P0C7W0 189 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 CCT6AP40227 531 aaKnown RBP10.51□□□□□ -0.73
HPS4-203ENST00000402105 GPIHBP1Q8IV16 184 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 L2HGDHQ9H9P8 463 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 SUGCTQ9HAC7 445 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 MTMR7Q9Y216 660 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 FANCGO15287 622 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 SASH3O75995 380 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 METTL16Q86W50 562 aaKnown RBP10.51□□□□□ -0.73
HPS4-203ENST00000402105 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 PLEKHA4Q9H4M7 779 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 PARP3Q9Y6F1 533 aa10.51□□□□□ -0.73
HPS4-203ENST00000402105 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 VWA3AA6NCI4 1184 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 FAM193AP78312 1265 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 NR5A1Q13285 461 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 IFIT5Q13325 482 aaKnown RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 TRIM65Q6PJ69 517 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 REXO1L1PQ8IX06 675 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 NBPF26B4DH59 902 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 FMR1Q06787 632 aaKnown RBP eCLIP10.5□□□□□ -0.73
HPS4-203ENST00000402105 SSRP1Q08945 709 aaKnown RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 NBPF14Q5TI25 921 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 NBPF10Q6P3W6 841 aaKnown RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 USP49Q70CQ1 688 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 EEF2KMTQ96G04 330 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 HOOK1Q9UJC3 728 aaKnown RBP10.5□□□□□ -0.73
HPS4-203ENST00000402105 MINDY4BA8MYZ0 360 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 CYP27B1O15528 508 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 ARHGAP6O43182 974 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 TADA3O75528 432 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 GUCY1A2P33402 732 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 TBC1D10CQ8IV04 446 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
HPS4-203ENST00000402105 EFCAB8A8MWE9 144 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 TEX33O43247 280 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 CYP2C19P33261 490 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 SLC4A8Q2Y0W8 1093 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 ANKLE2Q86XL3 938 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms