RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 ZNF532Q9HCE3 1301 aa12.21□□□□□ -0.46
PPP4R1-203ENST00000400556 COBLO75128 1261 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 ITGA6P23229 1130 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 ANGEL1Q9UNK9 670 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 PCDHA5Q9Y5H7 936 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 TPM4P67936 248 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 SLC39A14Q15043 492 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 ATL3Q6DD88 541 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 APOA5Q6Q788 366 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 GPR108Q9NPR9 543 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.2□□□□□ -0.469e-7■■■□□ 15
PPP4R1-203ENST00000400556 GOLGA8AA7E2F4 631 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 CMA1P23946 247 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 ADKP55263 362 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
PPP4R1-203ENST00000400556 SEC31AO94979 1220 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 CASP1P29466 404 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 TCIRG1Q13488 830 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 BRAPQ7Z569 592 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 METTL16Q86W50 562 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 DESI2Q9BSY9 194 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 PRKAB2O43741 272 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 IARSP41252 1262 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 KRT222Q8N1A0 295 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 CARD6Q9BX69 1037 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 ZBTB43O43298 467 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 PRR29P0C7W0 189 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 BMP6P22004 513 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 USP49Q70CQ1 688 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 NUP133Q8WUM0 1156 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
PPP4R1-203ENST00000400556 NR5A1Q13285 461 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 CCDC150Q8NCX0 1101 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 ARMT1Q9H993 441 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 TBC1D2BQ9UPU7 963 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 A0A0U1RQG5 324 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 IFIT3O14879 490 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 ZBTB22O15209 634 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 POLR3GO15318 223 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 SLFN14P0C7P3 912 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 CLCN6P51797 869 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 CIAO1O76071 339 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 EVCP57679 992 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 MYL5Q02045 173 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 TRIM29Q14134 588 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 KLHL10Q6JEL2 608 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 MIGA1Q8NAN2 632 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 AIDAQ96BJ3 306 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■□□□ 11.5
PPP4R1-203ENST00000400556 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 MORC2Q9Y6X9 1032 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 TMEM94Q12767 1356 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 SYCP1Q15431 976 aa12.18□□□□□ -0.46
PPP4R1-203ENST00000400556 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 SH2B2O14492 632 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ZFYP08048 801 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ADD2P35612 726 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 STX17P56962 302 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 PTPAQ15257 358 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 CREBRFQ8IUR6 639 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 MNS1Q8NEH6 495 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 INTS13Q9NVM9 706 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ZSWIM5Q9P217 1185 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 IMPACTQ9P2X3 320 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 PHRF1Q9P1Y6 1649 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ZMYM6O95789 1325 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 NRDCO43847 1150 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 PDE6AP16499 860 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 FMR1Q06787 632 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■□ 20.3
PPP4R1-203ENST00000400556 STAMQ92783 540 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■□□□ 11.9
PPP4R1-203ENST00000400556 FAM205CA6NFA0 338 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 MBD4O95243 580 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 ETF1P62495 437 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 OLFM4Q6UX06 510 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 TRMT112Q9UI30 125 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-203ENST00000400556 A0A0U1RQJ8 604 aa12.16□□□□□ -0.46
PPP4R1-203ENST00000400556 MTF1Q14872 753 aa12.16□□□□□ -0.46
PPP4R1-203ENST00000400556 CCDC102BQ68D86 513 aa12.16□□□□□ -0.46
PPP4R1-203ENST00000400556 ATRIPQ8WXE1 791 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms