RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PRDM10Q9NQV6 1147 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 KCND1Q9NSA2 647 aa29.66■■■□□ 2.34
COL13A1-203ENST00000398969 ANGEL1Q9UNK9 670 aaKnown RBP29.66■■■□□ 2.34
COL13A1-203ENST00000398969 NLRP12P59046 1061 aa29.65■■■□□ 2.34
COL13A1-203ENST00000398969 LDHAL6AQ6ZMR3 332 aa29.65■■■□□ 2.34
COL13A1-203ENST00000398969 CCAR2Q8N163 923 aaKnown RBP29.65■■■□□ 2.34
COL13A1-203ENST00000398969 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.65■■■□□ 2.34
COL13A1-203ENST00000398969 ITGA6P23229 1130 aa29.65■■■□□ 2.34
COL13A1-203ENST00000398969 SLC9C2Q5TAH2 1124 aa29.65■■■□□ 2.34
COL13A1-203ENST00000398969 NKX2-3Q8TAU0 364 aa29.65■■■□□ 2.34
COL13A1-203ENST00000398969 ZNF512BQ96KM6 892 aaPredicted RBP29.65■■■□□ 2.34
COL13A1-203ENST00000398969 MROH7-TTC4A0A0A0MT08 1334 aa29.64■■■□□ 2.34
COL13A1-203ENST00000398969 U2AF2P26368 475 aaKnown RBP eCLIP29.64■■■□□ 2.34
COL13A1-203ENST00000398969 CYB5R4Q7L1T6 521 aa29.64■■■□□ 2.34
COL13A1-203ENST00000398969 TTLL11Q8NHH1 800 aa29.64■■■□□ 2.34
COL13A1-203ENST00000398969 GREM2Q9H772 168 aa29.64■■■□□ 2.34
COL13A1-203ENST00000398969 MAP3K15Q6ZN16 1313 aa29.64■■■□□ 2.34
COL13A1-203ENST00000398969 BIN1O00499 593 aa29.64■■■□□ 2.33
COL13A1-203ENST00000398969 WDHD1O75717 1129 aaPredicted RBP29.64■■■□□ 2.33
COL13A1-203ENST00000398969 SLC39A14Q15043 492 aa29.64■■■□□ 2.33
COL13A1-203ENST00000398969 ACSBG1Q96GR2 724 aa29.64■■■□□ 2.33
COL13A1-203ENST00000398969 AIFM3Q96NN9 605 aa29.64■■■□□ 2.33
COL13A1-203ENST00000398969 XPO4Q9C0E2 1151 aaKnown RBP29.64■■■□□ 2.33
COL13A1-203ENST00000398969 ZBTB1Q9Y2K1 713 aa29.64■■■□□ 2.33
COL13A1-203ENST00000398969 SH2B2O14492 632 aaPredicted RBP29.63■■■□□ 2.33
COL13A1-203ENST00000398969 GIGYF2Q6Y7W6 1299 aaKnown RBP29.63■■■□□ 2.33
COL13A1-203ENST00000398969 ALG1Q9BT22 464 aa29.63■■■□□ 2.33
COL13A1-203ENST00000398969 METAP2P50579 478 aaKnown RBP eCLIP29.62■■■□□ 2.33
COL13A1-203ENST00000398969 TTF1Q15361 905 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-203ENST00000398969 PIH1D3Q9NQM4 214 aaKnown RBP29.62■■■□□ 2.33
COL13A1-203ENST00000398969 TRMT1Q9NXH9 659 aaKnown RBP29.62■■■□□ 2.33
COL13A1-203ENST00000398969 IFNKQ9P0W0 207 aa29.62■■■□□ 2.33
COL13A1-203ENST00000398969 PRDM4Q9UKN5 801 aa29.62■■■□□ 2.33
COL13A1-203ENST00000398969 SMC2O95347 1197 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 MARCKSP29966 332 aaPredicted RBP29.61■■■□□ 2.33
COL13A1-203ENST00000398969 NAA30Q147X3 362 aaPredicted RBP29.61■■■□□ 2.33
COL13A1-203ENST00000398969 NCAPHQ15003 741 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 NLRP10Q86W26 655 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 VGLL2Q8N8G2 317 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 GPTP24298 496 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 UBE3CQ15386 1083 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 HLFQ16534 295 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 C8orf37Q96NL8 207 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 CNNM1Q9NRU3 951 aa29.61■■■□□ 2.33
COL13A1-203ENST00000398969 A0A0G2JS52 829 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 ANKRD18BA2A2Z9 1011 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 SPDYE4A6NLX3 237 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 CDKL5O76039 1030 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 VPS37DQ86XT2 251 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 NGLY1Q96IV0 654 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 ZSCAN20P17040 1043 aaPredicted RBP29.6■■■□□ 2.33
COL13A1-203ENST00000398969 CTSWP56202 376 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 APOA5Q6Q788 366 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 TIGD1Q96MW7 591 aa29.6■■■□□ 2.33
COL13A1-203ENST00000398969 IDH1O75874 414 aaKnown RBP29.59■■■□□ 2.33
COL13A1-203ENST00000398969 RXRAP19793 462 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 TPM4P67936 248 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 KRT40Q6A162 431 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 APPP05067 770 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 TMC6Q7Z403 805 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 CCDC150Q8NCX0 1101 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 ZNF532Q9HCE3 1301 aa29.59■■■□□ 2.33
COL13A1-203ENST00000398969 BCL9LQ86UU0 1499 aa29.58■■■□□ 2.33
COL13A1-203ENST00000398969 CDC27P30260 824 aa29.58■■■□□ 2.33
COL13A1-203ENST00000398969 SENP2Q9HC62 589 aa29.58■■■□□ 2.33
COL13A1-203ENST00000398969 HPSEQ9Y251 543 aa29.58■■■□□ 2.33
COL13A1-203ENST00000398969 IL6STP40189 918 aaPredicted RBP29.57■■■□□ 2.32
COL13A1-203ENST00000398969 ARMCX5Q6P1M9 558 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 FEZ1Q99689 392 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 MYO5AQ9Y4I1 1855 aaKnown RBP29.57■■■□□ 2.32
COL13A1-203ENST00000398969 B4E1Z4 1266 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 PPP6R2O75170 966 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 SYKP43405 635 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 PTPAQ15257 358 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 PHKBQ93100 1093 aa29.57■■■□□ 2.32
COL13A1-203ENST00000398969 CGNQ9P2M7 1197 aaKnown RBP29.57■■■□□ 2.32
COL13A1-203ENST00000398969 PDE8BO95263 885 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 PDE6AP16499 860 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 VPS72Q15906 364 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 FAM98CQ17RN3 349 aaKnown RBP29.56■■■□□ 2.32
COL13A1-203ENST00000398969 CPLX2Q6PUV4 134 aaKnown RBP29.56■■■□□ 2.32
COL13A1-203ENST00000398969 TMEM87BQ96K49 555 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 TUBE1Q9UJT0 475 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 IKBKBO14920 756 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 SHC4Q6S5L8 630 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 MICU3Q86XE3 530 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 ECM29Q5VYK3 1845 aa29.56■■■□□ 2.32
COL13A1-203ENST00000398969 ARID4AP29374 1257 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-203ENST00000398969 PHKA1P46020 1223 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 DMTNQ08495 405 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 E4F1Q66K89 784 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-203ENST00000398969 CCDC102BQ68D86 513 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 JMYQ8N9B5 988 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 IGDCC4Q8TDY8 1250 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 MAP3K14Q99558 947 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 WWC3Q9ULE0 1092 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 TCRBV5S4A2TA0A5A2 114 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 IRS4O14654 1257 aaPredicted RBP29.55■■■□□ 2.32
COL13A1-203ENST00000398969 NTRK3Q16288 839 aa29.55■■■□□ 2.32
COL13A1-203ENST00000398969 TBC1D2BQ9UPU7 963 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms