RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TNIP1Q15025 636 aa21.75■■□□□ 1.07
MBD1-208ENST00000398493 GPC2Q8N158 579 aa21.75■■□□□ 1.07
MBD1-208ENST00000398493 AKAP11Q9UKA4 1901 aa21.75■■□□□ 1.07
MBD1-208ENST00000398493 ZC3H4Q9UPT8 1303 aaKnown RBP21.75■■□□□ 1.07
MBD1-208ENST00000398493 SHTN1A0MZ66 631 aa21.74■■□□□ 1.07
MBD1-208ENST00000398493 GMLQ99445 158 aa21.74■■□□□ 1.07
MBD1-208ENST00000398493 ZNF646O15015 1829 aaPredicted RBP21.74■■□□□ 1.07
MBD1-208ENST00000398493 GLTPD2A6NH11 291 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 PDS5AQ29RF7 1337 aaKnown RBP21.73■■□□□ 1.07
MBD1-208ENST00000398493 WDR66Q8TBY9 1149 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 HMGB1P09429 215 aaKnown RBP21.73■■□□□ 1.07
MBD1-208ENST00000398493 PRDX5P30044 214 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 GMPSP49915 693 aaPredicted RBP21.73■■□□□ 1.07
MBD1-208ENST00000398493 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 PIH1D3Q9NQM4 214 aaKnown RBP21.73■■□□□ 1.07
MBD1-208ENST00000398493 ABCF2Q9UG63 623 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 SMC3Q9UQE7 1217 aa21.73■■□□□ 1.07
MBD1-208ENST00000398493 F8W031 263 aaPredicted RBP21.72■■□□□ 1.07
MBD1-208ENST00000398493 BRD1O95696 1058 aa21.72■■□□□ 1.07
MBD1-208ENST00000398493 PKP1Q13835 747 aa21.72■■□□□ 1.07
MBD1-208ENST00000398493 DPY19L2Q6NUT2 758 aa21.72■■□□□ 1.07
MBD1-208ENST00000398493 KIAA0825Q8IV33 1275 aa21.72■■□□□ 1.07
MBD1-208ENST00000398493 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
MBD1-208ENST00000398493 SALL1Q9NSC2 1324 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 SCNN1DP51172 638 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 CTNNA3Q9UI47 895 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 ZDHHC9Q9Y397 364 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 PDIA4P13667 645 aaKnown RBP21.71■■□□□ 1.07
MBD1-208ENST00000398493 FKBP1AP62942 108 aaKnown RBP21.71■■□□□ 1.07
MBD1-208ENST00000398493 MCTP1Q6DN14 999 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 TBC1D22AQ8WUA7 517 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 APPBP2Q92624 585 aa21.71■■□□□ 1.07
MBD1-208ENST00000398493 MAST3O60307 1309 aa21.7■■□□□ 1.06
MBD1-208ENST00000398493 PSME4Q14997 1843 aa21.7■■□□□ 1.06
MBD1-208ENST00000398493 CHGBP05060 677 aa21.7■■□□□ 1.06
MBD1-208ENST00000398493 HSPD1P10809 573 aaKnown RBP21.7■■□□□ 1.06
MBD1-208ENST00000398493 AGBL3Q8NEM8 1001 aa21.7■■□□□ 1.06
MBD1-208ENST00000398493 POTECB2RU33 542 aa21.69■■□□□ 1.06
MBD1-208ENST00000398493 CYP21A2P08686 494 aa21.69■■□□□ 1.06
MBD1-208ENST00000398493 ZNF384Q8TF68 577 aa21.69■■□□□ 1.06
MBD1-208ENST00000398493 ZNF526Q8TF50 670 aaPredicted RBP21.69■■□□□ 1.06
MBD1-208ENST00000398493 OSBP2Q969R2 916 aa21.69■■□□□ 1.06
MBD1-208ENST00000398493 LARP6Q9BRS8 491 aaKnown RBP21.69■■□□□ 1.06
MBD1-208ENST00000398493 MYH13Q9UKX3 1938 aa21.68■■□□□ 1.06
MBD1-208ENST00000398493 EPS15P42566 896 aa21.68■■□□□ 1.06
MBD1-208ENST00000398493 CCDC83Q8IWF9 413 aa21.68■■□□□ 1.06
MBD1-208ENST00000398493 DPF2Q92785 391 aa21.68■■□□□ 1.06
MBD1-208ENST00000398493 CNOT7Q9UIV1 285 aaKnown RBP21.68■■□□□ 1.06
MBD1-208ENST00000398493 TTF2Q9UNY4 1162 aaKnown RBP21.68■■□□□ 1.06
MBD1-208ENST00000398493 MYO3BQ8WXR4 1341 aa21.67■■□□□ 1.06
MBD1-208ENST00000398493 RPS12P25398 132 aaKnown RBP21.67■■□□□ 1.06
MBD1-208ENST00000398493 MICALL2Q8IY33 904 aa21.67■■□□□ 1.06
MBD1-208ENST00000398493 L3MBTL3Q96JM7 780 aaPredicted RBP21.67■■□□□ 1.06
MBD1-208ENST00000398493 GPRC5DQ9NZD1 345 aa21.67■■□□□ 1.06
MBD1-208ENST00000398493 LRP2BPQ9P2M1 347 aa21.67■■□□□ 1.06
MBD1-208ENST00000398493 PCDHAC2Q9Y5I4 1007 aa21.67■■□□□ 1.06
MBD1-208ENST00000398493 M0R2C6 588 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 EGFRP00533 1210 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 LDHBP07195 334 aaKnown RBP21.66■■□□□ 1.06
MBD1-208ENST00000398493 USP17L8P0C7I0 530 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 IDH1O75874 414 aaKnown RBP21.66■■□□□ 1.06
MBD1-208ENST00000398493 MECOMQ03112 1051 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 DIXDC1Q155Q3 683 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 ME3Q16798 604 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 SLFNL1Q499Z3 407 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 NSUN4Q96CB9 384 aaKnown RBP21.66■■□□□ 1.06
MBD1-208ENST00000398493 RAI14Q9P0K7 980 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 TPCN1Q9ULQ1 816 aa21.66■■□□□ 1.06
MBD1-208ENST00000398493 UBE3CQ15386 1083 aa21.65■■□□□ 1.06
MBD1-208ENST00000398493 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
MBD1-208ENST00000398493 GZF1Q9H116 711 aaPredicted RBP21.65■■□□□ 1.06
MBD1-208ENST00000398493 DDX49Q9Y6V7 483 aaKnown RBP21.65■■□□□ 1.06
MBD1-208ENST00000398493 LARGE1O95461 756 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 ADD2P35612 726 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 FGD1P98174 961 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 SLC9C2Q5TAH2 1124 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 SAMD7Q7Z3H4 446 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 SUGT1Q9Y2Z0 365 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 TAF6LQ9Y6J9 622 aa21.64■■□□□ 1.06
MBD1-208ENST00000398493 ZNF280AP59817 542 aaPredicted RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 KLHL40Q2TBA0 621 aa21.64■■□□□ 1.05
MBD1-208ENST00000398493 FOXD4L5Q5VV16 416 aaPredicted RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 SPTY2D1Q68D10 685 aaPredicted RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 DHX32Q7L7V1 743 aaKnown RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 FOXD4L4Q8WXT5 416 aaPredicted RBP21.64■■□□□ 1.05
MBD1-208ENST00000398493 RRAGCQ9HB90 399 aa21.64■■□□□ 1.05
MBD1-208ENST00000398493 ATP6V1DQ9Y5K8 247 aa21.64■■□□□ 1.05
MBD1-208ENST00000398493 MYO5AQ9Y4I1 1855 aaKnown RBP21.63■■□□□ 1.05
MBD1-208ENST00000398493 STX6O43752 255 aa21.63■■□□□ 1.05
MBD1-208ENST00000398493 GJB2P29033 226 aa21.63■■□□□ 1.05
MBD1-208ENST00000398493 TOB2Q14106 344 aaPredicted RBP21.63■■□□□ 1.05
MBD1-208ENST00000398493 RBM26Q5T8P6 1007 aaKnown RBP21.63■■□□□ 1.05
MBD1-208ENST00000398493 ADGRA1Q86SQ6 560 aa21.63■■□□□ 1.05
MBD1-208ENST00000398493 NMRK2Q9NPI5 230 aa21.63■■□□□ 1.05
MBD1-208ENST00000398493 MAP3K12Q12852 859 aa21.62■■□□□ 1.05
MBD1-208ENST00000398493 TBC1D10BQ4KMP7 808 aaPredicted RBP21.62■■□□□ 1.05
MBD1-208ENST00000398493 DZIP1Q86YF9 867 aaKnown RBP21.62■■□□□ 1.05
MBD1-208ENST00000398493 OGFOD1Q8N543 542 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms