RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 MKRN3Q13064 507 aaKnown RBP21.47■■□□□ 1.03
UPK3A-202ENST00000396082 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 LDLRAD1Q5T700 205 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 FKBP1CQ5VVH2 108 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 CDC42EP5Q6NZY7 148 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 FAM83AQ86UY5 434 aa21.47■■□□□ 1.03
UPK3A-202ENST00000396082 CDAN1Q8IWY9 1227 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 REM2Q8IYK8 340 aaPredicted RBP21.46■■□□□ 1.03
UPK3A-202ENST00000396082 TNS4Q8IZW8 715 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 SLC10A4Q96EP9 437 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 TEPSINQ96N21 525 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 CCDC8Q9H0W5 538 aaPredicted RBP21.46■■□□□ 1.03
UPK3A-202ENST00000396082 USP40Q9NVE5 1235 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 RAI14Q9P0K7 980 aa21.46■■□□□ 1.03
UPK3A-202ENST00000396082 AK9Q5TCS8 1911 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 APBB1O00213 710 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 USP2O75604 605 aaPredicted RBP21.45■■□□□ 1.02
UPK3A-202ENST00000396082 TBC1D9Q6ZT07 1266 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 EAF2Q96CJ1 260 aaPredicted RBP21.45■■□□□ 1.02
UPK3A-202ENST00000396082 HOOK2Q96ED9 719 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 SNRKQ9NRH2 765 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 LRP2BPQ9P2M1 347 aa21.45■■□□□ 1.02
UPK3A-202ENST00000396082 DBNLQ9UJU6 430 aaKnown RBP21.45■■□□□ 1.02
UPK3A-202ENST00000396082 GSTO1P78417 241 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 MECOMQ03112 1051 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 TCP10Q12799 353 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 AACSQ86V21 672 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 ANKRD13AQ8IZ07 590 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 CLMNQ96JQ2 1002 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 CSRNP1Q96S65 589 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 BCL11AQ9H165 835 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 IL1RAPL2Q9NP60 686 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 TLR7Q9NYK1 1049 aaKnown RBP21.44■■□□□ 1.02
UPK3A-202ENST00000396082 GAKO14976 1311 aa21.44■■□□□ 1.02
UPK3A-202ENST00000396082 OTOFQ9HC10 1997 aa21.43■■□□□ 1.02
UPK3A-202ENST00000396082 UNCXA6NJT0 531 aa21.43■■□□□ 1.02
UPK3A-202ENST00000396082 RHPN1Q8TCX5 695 aa21.43■■□□□ 1.02
UPK3A-202ENST00000396082 MROH7-TTC4A0A0A0MT08 1334 aa21.43■■□□□ 1.02
UPK3A-202ENST00000396082 RPAP1Q9BWH6 1393 aaPredicted RBP21.43■■□□□ 1.02
UPK3A-202ENST00000396082 LDHCP07864 332 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 BTDP43251 543 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 NFIAQ12857 509 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 SPRYD7Q5W111 196 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 SIRT2Q8IXJ6 389 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 FAM151AQ8WW52 585 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
UPK3A-202ENST00000396082 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 TRPA1O75762 1119 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 SREBF2Q12772 1141 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 DCAF15Q66K64 600 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 CLASRPQ8N2M8 674 aaKnown RBP21.41■■□□□ 1.02
UPK3A-202ENST00000396082 NSUN4Q96CB9 384 aaKnown RBP21.41■■□□□ 1.02
UPK3A-202ENST00000396082 WNK4Q96J92 1243 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
UPK3A-202ENST00000396082 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 SAGE1Q9NXZ1 904 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 CSADQ9Y600 493 aa21.41■■□□□ 1.02
UPK3A-202ENST00000396082 RRP1P56182 461 aaKnown RBP21.4■■□□□ 1.02
UPK3A-202ENST00000396082 FAM163AQ96GL9 167 aaPredicted RBP21.4■■□□□ 1.02
UPK3A-202ENST00000396082 NOL10Q9BSC4 688 aaKnown RBP21.4■■□□□ 1.02
UPK3A-202ENST00000396082 ELP3Q9H9T3 547 aa21.4■■□□□ 1.02
UPK3A-202ENST00000396082 RAB11FIP3O75154 756 aa21.39■■□□□ 1.01
UPK3A-202ENST00000396082 ZBTB48P10074 688 aaPredicted RBP21.39■■□□□ 1.01
UPK3A-202ENST00000396082 ZAP70P43403 619 aa21.39■■□□□ 1.01
UPK3A-202ENST00000396082 MAP3K9P80192 1104 aa21.39■■□□□ 1.01
UPK3A-202ENST00000396082 FAM198AQ9UFP1 575 aa21.39■■□□□ 1.01
UPK3A-202ENST00000396082 GPR75-ASB3A0A0A6YYF3 556 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
UPK3A-202ENST00000396082 RGS3P49796 1198 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 PICALMQ13492 652 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 IFFO2Q5TF58 517 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 NAA16Q6N069 864 aaPredicted RBP21.38■■□□□ 1.01
UPK3A-202ENST00000396082 MIGA2Q7L4E1 593 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 ZSCAN29Q8IWY8 852 aaPredicted RBP21.38■■□□□ 1.01
UPK3A-202ENST00000396082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.38■■□□□ 1.01
UPK3A-202ENST00000396082 WRNIP1Q96S55 665 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 ZNF341Q9BYN7 854 aa21.38■■□□□ 1.01
UPK3A-202ENST00000396082 DOCK2Q92608 1830 aa21.37■■□□□ 1.01
UPK3A-202ENST00000396082 MANSC4A6NHS7 340 aaPredicted RBP21.37■■□□□ 1.01
UPK3A-202ENST00000396082 ENTPD3O75355 529 aa21.37■■□□□ 1.01
UPK3A-202ENST00000396082 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
UPK3A-202ENST00000396082 VGLL4Q14135 290 aa21.37■■□□□ 1.01
UPK3A-202ENST00000396082 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.37■■□□□ 1.01
UPK3A-202ENST00000396082 ZNF384Q8TF68 577 aa21.37■■□□□ 1.01
UPK3A-202ENST00000396082 IDI2Q9BXS1 227 aa21.37■■□□□ 1.01
UPK3A-202ENST00000396082 CASP8AP2Q9UKL3 1982 aa21.36■■□□□ 1.01
UPK3A-202ENST00000396082 TM4SF4P48230 202 aa21.36■■□□□ 1.01
UPK3A-202ENST00000396082 OPTNQ96CV9 577 aa21.36■■□□□ 1.01
UPK3A-202ENST00000396082 MYO5AQ9Y4I1 1855 aaKnown RBP21.36■■□□□ 1.01
UPK3A-202ENST00000396082 PIH1D3Q9NQM4 214 aaKnown RBP21.35■■□□□ 1.01
UPK3A-202ENST00000396082 RFX7Q2KHR2 1363 aa21.35■■□□□ 1.01
UPK3A-202ENST00000396082 WDHD1O75717 1129 aaPredicted RBP21.34■■□□□ 1.01
UPK3A-202ENST00000396082 IDH1O75874 414 aaKnown RBP21.34■■□□□ 1.01
UPK3A-202ENST00000396082 BAG3O95817 575 aa21.34■■□□□ 1.01
UPK3A-202ENST00000396082 INHBEP58166 350 aa21.34■■□□□ 1.01
UPK3A-202ENST00000396082 ZFPM1Q8IX07 1006 aa21.34■■□□□ 1.01
UPK3A-202ENST00000396082 IGSF3O75054 1194 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 MAP4K4O95819 1239 aaPredicted RBP21.33■■□□□ 1.01
UPK3A-202ENST00000396082 GJA5P36382 358 aa21.33■■□□□ 1.01
UPK3A-202ENST00000396082 RHBDL3P58872 404 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms