RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PPM1EQ8WY54 764 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 PDLIM2Q96JY6 352 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 CXorf56Q9H5V9 222 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 JADE2Q9NQC1 790 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 SERTAD1Q9UHV2 236 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 JRKLQ9Y4A0 524 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 USP3Q9Y6I4 520 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 SYNRGQ9UMZ2 1314 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 NPC1L1Q9UHC9 1359 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 RRBP1Q9P2E9 1410 aaKnown RBP4.28□□□□□ -1.72
XRCC4-203ENST00000396027 ZMYM4Q5VZL5 1548 aa4.28□□□□□ -1.72
XRCC4-203ENST00000396027 LOC102724159A0A0B4J2E5 919 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 ANKRD18BA2A2Z9 1011 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 E9PSI1 815 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 SASH1O94885 1247 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 ZSCAN22P10073 491 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-203ENST00000396027 MAP2K2P36507 400 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 CTSWP56202 376 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 TPM4P67936 248 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 ICA1Q05084 483 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 PWP2Q15269 919 aaKnown RBP4.27□□□□□ -1.73
XRCC4-203ENST00000396027 FAM177A1Q8N128 213 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-203ENST00000396027 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-203ENST00000396027 KLHL23Q8NBE8 558 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 SH3GL3Q99963 347 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 GDPD2Q9HCC8 539 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 A1CFQ9NQ94 594 aaKnown RBP4.27□□□□□ -1.73
XRCC4-203ENST00000396027 FRMD4BQ9Y2L6 1034 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 CGNL1Q0VF96 1302 aa4.27□□□□□ -1.73
XRCC4-203ENST00000396027 SGSM2O43147 1006 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CTIFO43310 598 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 TPM1P09493 284 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ATP2B1P20020 1258 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 NOS2P35228 1153 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 RWDD2BP57060 319 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CBX1P83916 185 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 DHX8Q14562 1220 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 RBBP5Q15291 538 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 TAF7Q15545 349 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 MAP7D1Q3KQU3 841 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CLEC17AQ6ZS10 378 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 BEND4Q6ZU67 534 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 MROH2BQ7Z745 1585 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 AEBP1Q8IUX7 1158 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 TMC1Q8TDI8 760 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ANKRD7Q92527 254 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CFAP53Q96M91 514 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CHCHD3Q9NX63 227 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 POGKQ9P215 609 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 RSPH14Q9UHP6 348 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 DDX41Q9UJV9 622 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 SUFUQ9UMX1 484 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 HIF3AQ9Y2N7 669 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 FHAD1B1AJZ9 1412 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ATAD2Q6PL18 1390 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 SFI1A8K8P3 1242 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 BACH1O14867 736 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 NBPF7P0C2Y1 421 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 SLFN14P0C7P3 912 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 PRPHP41219 470 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ABL2P42684 1182 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ZNF445P59923 1031 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 VAC14Q08AM6 782 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 MESP2Q0VG99 397 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CT47A1Q5JQC4 288 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 C1orf53Q5VUE5 145 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 AP1ARQ63HQ0 302 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 SDCCAG8Q86SQ7 713 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 KIAA1328Q86T90 577 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 EFCAB13Q8IY85 973 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 MIPOL1Q8TD10 442 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 ZDHHC1Q8WTX9 485 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 FAM168AQ92567 244 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 DDX11Q96FC9 970 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 PPP1R16BQ96T49 567 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 OSBPL1AQ9BXW6 950 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 IQCGQ9H095 443 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 INCENPQ9NQS7 918 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 PAK6Q9NQU5 681 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 CWC25Q9NXE8 425 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 PSD3Q9NYI0 1048 aa4.26□□□□□ -1.73
XRCC4-203ENST00000396027 DDX49Q9Y6V7 483 aaKnown RBP4.26□□□□□ -1.73
XRCC4-203ENST00000396027 POLA1P09884 1462 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-203ENST00000396027 BAZ1BQ9UIG0 1483 aaKnown RBP4.25□□□□□ -1.73
XRCC4-203ENST00000396027 ARHGAP31Q2M1Z3 1444 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 KIF2AO00139 706 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-203ENST00000396027 C21orf2O43822 256 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 PPFIA2O75334 1257 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 ERLIN1O75477 346 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 MAP3K6O95382 1288 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 TSPAN15O95858 294 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 VDRP11473 427 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 CYP2C19P33261 490 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 MAGEA9P43362 315 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 TUBB4BP68371 445 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 FAM50AQ14320 339 aaKnown RBP4.25□□□□□ -1.73
XRCC4-203ENST00000396027 KLHL40Q2TBA0 621 aa4.25□□□□□ -1.73
XRCC4-203ENST00000396027 TTC31Q49AM3 519 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-203ENST00000396027 TBC1D10BQ4KMP7 808 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms