RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 PDS5AQ29RF7 1337 aaKnown RBP20.08■□□□□ 0.81
CXCL12-206ENST00000395795 TNNI2P48788 182 aa20.08■□□□□ 0.81
CXCL12-206ENST00000395795 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.08■□□□□ 0.81
CXCL12-206ENST00000395795 RFX7Q2KHR2 1363 aa20.08■□□□□ 0.8
CXCL12-206ENST00000395795 GAKO14976 1311 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 INHBEP58166 350 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 MAP3K9P80192 1104 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 OPTNQ96CV9 577 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 GNL3LQ9NVN8 582 aaKnown RBP20.07■□□□□ 0.8
CXCL12-206ENST00000395795 FAM198AQ9UFP1 575 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 SNCAIPQ9Y6H5 919 aa20.07■□□□□ 0.8
CXCL12-206ENST00000395795 ZBTB7BO15156 539 aaPredicted RBP20.06■□□□□ 0.8
CXCL12-206ENST00000395795 LDHBP07195 334 aaKnown RBP20.06■□□□□ 0.8
CXCL12-206ENST00000395795 CAP1Q01518 475 aa20.06■□□□□ 0.8
CXCL12-206ENST00000395795 ZFPM1Q8IX07 1006 aa20.06■□□□□ 0.8
CXCL12-206ENST00000395795 SSH3Q8TE77 659 aa20.06■□□□□ 0.8
CXCL12-206ENST00000395795 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
CXCL12-206ENST00000395795 FAM151AQ8WW52 585 aa20.05■□□□□ 0.8
CXCL12-206ENST00000395795 BRI3BPQ8WY22 251 aa20.05■□□□□ 0.8
CXCL12-206ENST00000395795 ATP8B2P98198 1209 aa20.04■□□□□ 0.8
CXCL12-206ENST00000395795 PI16Q6UXB8 463 aa20.04■□□□□ 0.8
CXCL12-206ENST00000395795 FAM163AQ96GL9 167 aaPredicted RBP20.04■□□□□ 0.8
CXCL12-206ENST00000395795 C1orf115Q9H7X2 142 aa20.04■□□□□ 0.8
CXCL12-206ENST00000395795 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
CXCL12-206ENST00000395795 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
CXCL12-206ENST00000395795 SPDYE5A6NIY4 337 aa20.03■□□□□ 0.8
CXCL12-206ENST00000395795 ALDH1A1P00352 501 aa20.03■□□□□ 0.8
CXCL12-206ENST00000395795 ZKSCAN4Q969J2 545 aaPredicted RBP20.03■□□□□ 0.8
CXCL12-206ENST00000395795 TMOD2Q9NZR1 351 aa20.03■□□□□ 0.8
CXCL12-206ENST00000395795 ZNF112Q9UJU3 913 aa20.03■□□□□ 0.8
CXCL12-206ENST00000395795 FKTNO75072 461 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 ARID4AP29374 1257 aaPredicted RBP20.02■□□□□ 0.8
CXCL12-206ENST00000395795 INPP5BP32019 993 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 CRHR2Q13324 411 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
CXCL12-206ENST00000395795 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 SH3BP5LQ7L8J4 393 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 IDI2Q9BXS1 227 aa20.02■□□□□ 0.8
CXCL12-206ENST00000395795 MYH2Q9UKX2 1941 aa20.02■□□□□ 0.79
CXCL12-206ENST00000395795 WDHD1O75717 1129 aaPredicted RBP20.01■□□□□ 0.79
CXCL12-206ENST00000395795 TCP10Q12799 353 aa20.01■□□□□ 0.79
CXCL12-206ENST00000395795 WRNIP1Q96S55 665 aa20.01■□□□□ 0.79
CXCL12-206ENST00000395795 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
CXCL12-206ENST00000395795 HPS5Q9UPZ3 1129 aa20.01■□□□□ 0.79
CXCL12-206ENST00000395795 MCAMP43121 646 aa20■□□□□ 0.79
CXCL12-206ENST00000395795 RHBDL3P58872 404 aa20■□□□□ 0.79
CXCL12-206ENST00000395795 OTUD5Q96G74 571 aa20■□□□□ 0.79
CXCL12-206ENST00000395795 NEUROD6Q96NK8 337 aa20■□□□□ 0.79
CXCL12-206ENST00000395795 GPR108Q9NPR9 543 aa20■□□□□ 0.79
CXCL12-206ENST00000395795 DDX4Q9NQI0 724 aaKnown RBP20■□□□□ 0.79
CXCL12-206ENST00000395795 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CXCL12-206ENST00000395795 SLURP2P0DP57 97 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 MECOMQ03112 1051 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 G3BP1Q13283 466 aaKnown RBP eCLIP19.99■□□□□ 0.79
CXCL12-206ENST00000395795 TBC1D9Q6ZT07 1266 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 ERO1BQ86YB8 467 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 ZGPATQ8N5A5 531 aaKnown RBP19.99■□□□□ 0.79
CXCL12-206ENST00000395795 ABCF2Q9UG63 623 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 CSADQ9Y600 493 aa19.99■□□□□ 0.79
CXCL12-206ENST00000395795 GPR75-ASB3A0A0A6YYF3 556 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 CCL15-CCL14A0A0B4J2E2 113 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 PHF20L1A8MW92 1017 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 IRF6O14896 467 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 RGS3P49796 1198 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 PKN2Q16513 984 aaKnown RBP19.98■□□□□ 0.79
CXCL12-206ENST00000395795 CCL15Q16663 113 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 TNNI3KQ59H18 835 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 SPATA5Q8NB90 893 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 NSUN4Q96CB9 384 aaKnown RBP19.98■□□□□ 0.79
CXCL12-206ENST00000395795 ZNF341Q9BYN7 854 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 FPGT-TNNI3KV9GXZ4 949 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 MROH7-TTC4A0A0A0MT08 1334 aa19.98■□□□□ 0.79
CXCL12-206ENST00000395795 ENTPD3O75355 529 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 GTF2A2P52657 109 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 PPIL2Q13356 520 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 MOGSQ13724 837 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 DCAF15Q66K64 600 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 DBNDD2Q9BQY9 259 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 HTTP42858 3142 aa19.97■□□□□ 0.79
CXCL12-206ENST00000395795 DDTLA6NHG4 134 aaPredicted RBP19.96■□□□□ 0.79
CXCL12-206ENST00000395795 BTDP43251 543 aa19.96■□□□□ 0.79
CXCL12-206ENST00000395795 NOL9Q5SY16 702 aaKnown RBP19.96■□□□□ 0.79
CXCL12-206ENST00000395795 CEP85Q6P2H3 762 aa19.96■□□□□ 0.79
CXCL12-206ENST00000395795 FBXO46Q6PJ61 603 aaPredicted RBP19.96■□□□□ 0.79
CXCL12-206ENST00000395795 OTOP1Q7RTM1 612 aa19.96■□□□□ 0.79
CXCL12-206ENST00000395795 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
CXCL12-206ENST00000395795 HOOK2Q96ED9 719 aa19.96■□□□□ 0.79
CXCL12-206ENST00000395795 BTBD19C9JJ37 291 aa19.95■□□□□ 0.78
CXCL12-206ENST00000395795 SOX10P56693 466 aa19.95■□□□□ 0.78
CXCL12-206ENST00000395795 SPTY2D1Q68D10 685 aaPredicted RBP19.95■□□□□ 0.78
CXCL12-206ENST00000395795 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
CXCL12-206ENST00000395795 DZIP1Q86YF9 867 aaKnown RBP19.95■□□□□ 0.78
CXCL12-206ENST00000395795 TLR7Q9NYK1 1049 aaKnown RBP19.95■□□□□ 0.78
CXCL12-206ENST00000395795 KCNH4Q9UQ05 1017 aa19.95■□□□□ 0.78
CXCL12-206ENST00000395795 SURF6O75683 361 aaKnown RBP19.94■□□□□ 0.78
CXCL12-206ENST00000395795 PPATQ06203 517 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms