RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 ELP3Q9H9T3 547 aa13.79□□□□□ -0.2
CNIH1-202ENST00000395573 CDK5RAP2Q96SN8 1893 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 KIAA0100Q14667 2235 aaKnown RBP13.78□□□□□ -0.2
CNIH1-202ENST00000395573 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
CNIH1-202ENST00000395573 CACNB3P54284 484 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 OPTNQ96CV9 577 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 SIL1Q9H173 461 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 TMOD2Q9NZR1 351 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
CNIH1-202ENST00000395573 BRCA2P51587 3418 aa13.78□□□□□ -0.2
CNIH1-202ENST00000395573 MKI67P46013 3256 aaKnown RBP13.77□□□□□ -0.2
CNIH1-202ENST00000395573 DOCK1Q14185 1865 aa13.77□□□□□ -0.21
CNIH1-202ENST00000395573 FBXO46Q6PJ61 603 aaPredicted RBP13.77□□□□□ -0.21
CNIH1-202ENST00000395573 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.21
CNIH1-202ENST00000395573 LPIN2Q92539 896 aa13.77□□□□□ -0.21
CNIH1-202ENST00000395573 ZDHHC15Q96MV8 337 aa13.77□□□□□ -0.21
CNIH1-202ENST00000395573 SUGT1Q9Y2Z0 365 aa13.77□□□□□ -0.21
CNIH1-202ENST00000395573 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
CNIH1-202ENST00000395573 VGLL4Q14135 290 aa13.76□□□□□ -0.21
CNIH1-202ENST00000395573 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.76□□□□□ -0.21
CNIH1-202ENST00000395573 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
CNIH1-202ENST00000395573 API5Q9BZZ5 524 aaKnown RBP13.76□□□□□ -0.21
CNIH1-202ENST00000395573 CSADQ9Y600 493 aa13.76□□□□□ -0.21
CNIH1-202ENST00000395573 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
CNIH1-202ENST00000395573 CRHR2Q13324 411 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 ATP2B3Q16720 1220 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 HHIPL2Q6UWX4 724 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.213e-15■■□□□ 12.3
CNIH1-202ENST00000395573 MRIQ9BWK5 157 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 CEP126Q9P2H0 1117 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 TRIM17Q9Y577 477 aa13.75□□□□□ -0.21
CNIH1-202ENST00000395573 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
CNIH1-202ENST00000395573 FOCADQ5VW36 1801 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 TESPA1A2RU30 521 aaPredicted RBP13.74□□□□□ -0.21
CNIH1-202ENST00000395573 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 CIAO1O76071 339 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 FKBP1CQ5VVH2 108 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 APOBEC3HQ6NTF7 200 aaKnown RBP13.74□□□□□ -0.21
CNIH1-202ENST00000395573 FAM83AQ86UY5 434 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 OTUD5Q96G74 571 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 ERO1AQ96HE7 468 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 PTPN18Q99952 460 aa13.74□□□□□ -0.21
CNIH1-202ENST00000395573 MAST2Q6P0Q8 1798 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 CCL15-CCL14A0A0B4J2E2 113 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 IL15P40933 162 aaPredicted RBP13.73□□□□□ -0.21
CNIH1-202ENST00000395573 GTF2A2P52657 109 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 CCL15Q16663 113 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 OTOP1Q7RTM1 612 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 CD99L2Q8TCZ2 262 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 WRNIP1Q96S55 665 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 MEIS3Q99687 375 aa13.73□□□□□ -0.21
CNIH1-202ENST00000395573 GNL3LQ9NVN8 582 aaKnown RBP13.73□□□□□ -0.21
CNIH1-202ENST00000395573 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
CNIH1-202ENST00000395573 MAP3K13O43283 966 aa13.72□□□□□ -0.21
CNIH1-202ENST00000395573 RARSP54136 660 aaKnown RBP13.72□□□□□ -0.21
CNIH1-202ENST00000395573 DCAF15Q66K64 600 aa13.72□□□□□ -0.21
CNIH1-202ENST00000395573 BRI3BPQ8WY22 251 aa13.72□□□□□ -0.21
CNIH1-202ENST00000395573 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
CNIH1-202ENST00000395573 SNCAIPQ9Y6H5 919 aa13.72□□□□□ -0.21
CNIH1-202ENST00000395573 LDHBP07195 334 aaKnown RBP13.71□□□□□ -0.21
CNIH1-202ENST00000395573 PRDX5P30044 214 aa13.71□□□□□ -0.21
CNIH1-202ENST00000395573 PHKA1P46020 1223 aa13.71□□□□□ -0.21
CNIH1-202ENST00000395573 SP3Q02447 781 aa13.71□□□□□ -0.21
CNIH1-202ENST00000395573 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.21
CNIH1-202ENST00000395573 DIXDC1Q155Q3 683 aa13.71□□□□□ -0.21
CNIH1-202ENST00000395573 ZKSCAN4Q969J2 545 aaPredicted RBP13.71□□□□□ -0.21
CNIH1-202ENST00000395573 DENND2AQ9ULE3 1009 aa13.71□□□□□ -0.21
CNIH1-202ENST00000395573 DOCK3Q8IZD9 2030 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 SEMA3EO15041 775 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 GNAI3P08754 354 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 TCP10Q12799 353 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 ERO1BQ86YB8 467 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 FAM151AQ8WW52 585 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 EFCC1Q9HA90 598 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 ZFYVE28Q9HCC9 887 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 COPRSQ9NQ92 184 aa13.7□□□□□ -0.22
CNIH1-202ENST00000395573 SALL1Q9NSC2 1324 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 MYH1P12882 1939 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 SRGAP3O43295 1099 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 WDHD1O75717 1129 aaPredicted RBP13.69□□□□□ -0.22
CNIH1-202ENST00000395573 CETPP11597 493 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 ADORA1P30542 326 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
CNIH1-202ENST00000395573 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 FAM43AQ8N2R8 423 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
CNIH1-202ENST00000395573 NFIAQ12857 509 aa13.68□□□□□ -0.22
CNIH1-202ENST00000395573 PPIL2Q13356 520 aa13.68□□□□□ -0.22
CNIH1-202ENST00000395573 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
CNIH1-202ENST00000395573 CCDC102BQ68D86 513 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms