RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 BRF1Q92994 677 aa25.02■■□□□ 1.6
CLDND1-202ENST00000394180 PDE11AQ9HCR9 933 aa25.02■■□□□ 1.6
CLDND1-202ENST00000394180 MAP2K2P36507 400 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 NLRP12P59046 1061 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 HSP90B2PQ58FF3 399 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 FBXO41Q8TF61 875 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 GPATCH3Q96I76 525 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 USP44Q9H0E7 712 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 GLI3P10071 1580 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 SRGAP1Q7Z6B7 1085 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 KIFC2Q96AC6 838 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 QTRT2Q9H974 415 aaKnown RBP25.01■■□□□ 1.59
CLDND1-202ENST00000394180 VIPAS39Q9H9C1 493 aa25.01■■□□□ 1.59
CLDND1-202ENST00000394180 TRPC5Q9UL62 973 aaPredicted RBP25.01■■□□□ 1.59
CLDND1-202ENST00000394180 MAP4K4O95819 1239 aaPredicted RBP25■■□□□ 1.59
CLDND1-202ENST00000394180 EIF2S2P20042 333 aaKnown RBP25■■□□□ 1.59
CLDND1-202ENST00000394180 GPATCH11Q8N954 259 aa25■■□□□ 1.59
CLDND1-202ENST00000394180 SMARCC2Q8TAQ2 1214 aa25■■□□□ 1.59
CLDND1-202ENST00000394180 ZNF496Q96IT1 587 aaPredicted RBP25■■□□□ 1.59
CLDND1-202ENST00000394180 FANCCQ00597 558 aa25■■□□□ 1.59
CLDND1-202ENST00000394180 NCAPHQ15003 741 aa25■■□□□ 1.59
CLDND1-202ENST00000394180 MRPS27Q92552 414 aaKnown RBP25■■□□□ 1.59
CLDND1-202ENST00000394180 SYTL4Q96C24 671 aaPredicted RBP25■■□□□ 1.59
CLDND1-202ENST00000394180 STX10O60499 249 aa24.99■■□□□ 1.59
CLDND1-202ENST00000394180 STAG1Q8WVM7 1258 aa24.99■■□□□ 1.59
CLDND1-202ENST00000394180 TMOD3Q9NYL9 352 aa24.99■■□□□ 1.59
CLDND1-202ENST00000394180 ATRNO75882 1429 aa24.99■■□□□ 1.59
CLDND1-202ENST00000394180 ADALQ6DHV7 355 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 TTC5Q8N0Z6 440 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 FSIP1Q8NA03 581 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 DNAAF4Q8WXU2 420 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 ERCC4Q92889 916 aaPredicted RBP24.98■■□□□ 1.59
CLDND1-202ENST00000394180 AKAP2Q9Y2D5 859 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 SATB1Q01826 763 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 HDGFL1Q5TGJ6 251 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 PIGBQ92521 554 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 ECHDC1Q9NTX5 307 aa24.98■■□□□ 1.59
CLDND1-202ENST00000394180 GNG11P61952 73 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 VSTM4Q8IW00 320 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 HEG1Q9ULI3 1381 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 CHMP4BP1P59074 171 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 PPP1R42Q7Z4L9 355 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 TMEM139Q8IV31 216 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 CTCFLQ8NI51 663 aaPredicted RBP24.97■■□□□ 1.59
CLDND1-202ENST00000394180 ACSBG1Q96GR2 724 aa24.97■■□□□ 1.59
CLDND1-202ENST00000394180 SDF4Q9BRK5 362 aa24.96■■□□□ 1.59
CLDND1-202ENST00000394180 FAN1Q9Y2M0 1017 aa24.96■■□□□ 1.59
CLDND1-202ENST00000394180 FAM182BQ5T319 152 aa24.96■■□□□ 1.59
CLDND1-202ENST00000394180 MYCNP04198 464 aaPredicted RBP24.95■■□□□ 1.58
CLDND1-202ENST00000394180 AARSP49588 968 aaKnown RBP eCLIP24.95■■□□□ 1.58
CLDND1-202ENST00000394180 SART3Q15020 963 aaKnown RBP24.95■■□□□ 1.58
CLDND1-202ENST00000394180 CUTAO60888 179 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 FOXR1Q6PIV2 292 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 EPC1Q9H2F5 836 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 ANKZF1Q9H8Y5 726 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 ASAP1Q9ULH1 1129 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 ITGB4P16144 1822 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 PTCD1O75127 700 aaKnown RBP24.94■■□□□ 1.58
CLDND1-202ENST00000394180 SF3B2Q13435 895 aaKnown RBP24.94■■□□□ 1.58
CLDND1-202ENST00000394180 DPCR1Q3MIW9 517 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 POTEDQ86YR6 584 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 CNNM3Q8NE01 707 aa24.94■■□□□ 1.58
CLDND1-202ENST00000394180 WDR24Q96S15 920 aa24.93■■□□□ 1.58
CLDND1-202ENST00000394180 ATXN2Q99700 1313 aaKnown RBP24.93■■□□□ 1.58
CLDND1-202ENST00000394180 ERLIN2O94905 339 aa24.93■■□□□ 1.58
CLDND1-202ENST00000394180 ANXA1P04083 346 aa24.93■■□□□ 1.58
CLDND1-202ENST00000394180 IFIT2P09913 472 aaKnown RBP24.93■■□□□ 1.58
CLDND1-202ENST00000394180 SUFUQ9UMX1 484 aa24.93■■□□□ 1.58
CLDND1-202ENST00000394180 DOT1LQ8TEK3 1739 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 C21orf2O43822 256 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 USPL1Q5W0Q7 1092 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 CLASRPQ8N2M8 674 aaKnown RBP24.92■■□□□ 1.58
CLDND1-202ENST00000394180 FMNL2Q96PY5 1086 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 RTEL1Q9NZ71 1219 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 CDC23Q9UJX2 597 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 THSD7AQ9UPZ6 1657 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 HOXB7P09629 217 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 TOP1P11387 765 aaKnown RBP24.92■■□□□ 1.58
CLDND1-202ENST00000394180 UBASH3AP57075 661 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 MCM6Q14566 821 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 CHPF2Q9P2E5 772 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 MED23Q9ULK4 1368 aa24.92■■□□□ 1.58
CLDND1-202ENST00000394180 TBX2Q13207 712 aaPredicted RBP24.91■■□□□ 1.58
CLDND1-202ENST00000394180 MTX1Q13505 466 aa24.91■■□□□ 1.58
CLDND1-202ENST00000394180 DHX58Q96C10 678 aa24.91■■□□□ 1.58
CLDND1-202ENST00000394180 BCL9O00512 1426 aa24.91■■□□□ 1.58
CLDND1-202ENST00000394180 SHOX2O60902 331 aaPredicted RBP24.9■■□□□ 1.58
CLDND1-202ENST00000394180 CASP8Q14790 479 aa24.9■■□□□ 1.58
CLDND1-202ENST00000394180 USP28Q96RU2 1077 aa24.9■■□□□ 1.58
CLDND1-202ENST00000394180 C5P01031 1676 aa24.9■■□□□ 1.58
CLDND1-202ENST00000394180 SLC3A2P08195 630 aaKnown RBP24.9■■□□□ 1.58
CLDND1-202ENST00000394180 SEPT12Q8IYM1 358 aa24.9■■□□□ 1.58
CLDND1-202ENST00000394180 BAG1Q99933 345 aaPredicted RBP24.9■■□□□ 1.58
CLDND1-202ENST00000394180 KCNQ2O43526 872 aa24.89■■□□□ 1.58
CLDND1-202ENST00000394180 ONECUT3O60422 494 aaPredicted RBP24.89■■□□□ 1.58
CLDND1-202ENST00000394180 ME1P48163 572 aa24.89■■□□□ 1.58
CLDND1-202ENST00000394180 NEDD4P46934 1319 aa24.89■■□□□ 1.58
CLDND1-202ENST00000394180 E2F4Q16254 413 aa24.89■■□□□ 1.57
CLDND1-202ENST00000394180 MICALL1Q8N3F8 863 aa24.89■■□□□ 1.57
CLDND1-202ENST00000394180 KCNG4Q8TDN1 519 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms