RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SNAPC2Q13487 334 aa19.33■□□□□ 0.68
CHMP3-202ENST00000393773 NBPF11Q86T75 865 aa19.33■□□□□ 0.68
CHMP3-202ENST00000393773 PUM3Q15397 648 aaKnown RBP19.32■□□□□ 0.68
CHMP3-202ENST00000393773 HHIPL2Q6UWX4 724 aa19.32■□□□□ 0.68
CHMP3-202ENST00000393773 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
CHMP3-202ENST00000393773 SH3TC2Q8TF17 1288 aa19.32■□□□□ 0.68
CHMP3-202ENST00000393773 HOOK2Q96ED9 719 aa19.32■□□□□ 0.68
CHMP3-202ENST00000393773 PTPRCP08575 1304 aa19.31■□□□□ 0.68
CHMP3-202ENST00000393773 CTGFP29279 349 aa19.31■□□□□ 0.68
CHMP3-202ENST00000393773 DCAF15Q66K64 600 aa19.31■□□□□ 0.68
CHMP3-202ENST00000393773 ANP32CO43423 234 aa19.3■□□□□ 0.68
CHMP3-202ENST00000393773 WDHD1O75717 1129 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-202ENST00000393773 INPP5BP32019 993 aa19.3■□□□□ 0.68
CHMP3-202ENST00000393773 RFX5P48382 616 aaPredicted RBP19.3■□□□□ 0.68
CHMP3-202ENST00000393773 PPATQ06203 517 aa19.3■□□□□ 0.68
CHMP3-202ENST00000393773 SLC4A8Q2Y0W8 1093 aa19.3■□□□□ 0.68
CHMP3-202ENST00000393773 ZNF341Q9BYN7 854 aa19.3■□□□□ 0.68
CHMP3-202ENST00000393773 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
CHMP3-202ENST00000393773 GNRH1P01148 92 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 IFIT1P09914 478 aaKnown RBP19.29■□□□□ 0.68
CHMP3-202ENST00000393773 KIF22Q14807 665 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 C17orf99Q6UX52 265 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.29■□□□□ 0.68
CHMP3-202ENST00000393773 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 USP44Q9H0E7 712 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 KCNH4Q9UQ05 1017 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 DAGLAQ9Y4D2 1042 aa19.29■□□□□ 0.68
CHMP3-202ENST00000393773 ATAD5Q96QE3 1844 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 PRMT2P55345 433 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 MOGSQ13724 837 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 ANKRD23Q86SG2 305 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 FAM151AQ8WW52 585 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 ZNF112Q9UJU3 913 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 COLQQ9Y215 455 aaPredicted RBP19.28■□□□□ 0.68
CHMP3-202ENST00000393773 RFX7Q2KHR2 1363 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 ATRNL1Q5VV63 1379 aa19.28■□□□□ 0.68
CHMP3-202ENST00000393773 NFIAQ12857 509 aa19.27■□□□□ 0.68
CHMP3-202ENST00000393773 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
CHMP3-202ENST00000393773 TRIM47Q96LD4 638 aa19.27■□□□□ 0.68
CHMP3-202ENST00000393773 EYA2O00167 538 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 SLC5A1P13866 664 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 PRDX5P30044 214 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 DIXDC1Q155Q3 683 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 NOL9Q5SY16 702 aaKnown RBP19.26■□□□□ 0.67
CHMP3-202ENST00000393773 CDC42EP5Q6NZY7 148 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 ATG9AQ7Z3C6 839 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 CPA4Q9UI42 421 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 LOC285556D6RIA3 1793 aa19.26■□□□□ 0.67
CHMP3-202ENST00000393773 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 PDHXO00330 501 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 OSBPP22059 807 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 MTFR1Q15390 333 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 SSH1Q8WYL5 1049 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 LPIN2Q92539 896 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 FAM198AQ9UFP1 575 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 SRRDQ9UH36 339 aa19.25■□□□□ 0.67
CHMP3-202ENST00000393773 H0YGN5 161 aa19.24■□□□□ 0.67
CHMP3-202ENST00000393773 ECM2O94769 699 aaPredicted RBP19.24■□□□□ 0.67
CHMP3-202ENST00000393773 PSMC4P43686 418 aa19.24■□□□□ 0.67
CHMP3-202ENST00000393773 TCP10Q12799 353 aa19.24■□□□□ 0.67
CHMP3-202ENST00000393773 SALL1Q9NSC2 1324 aa19.23■□□□□ 0.67
CHMP3-202ENST00000393773 DOCK3Q8IZD9 2030 aa19.22■□□□□ 0.67
CHMP3-202ENST00000393773 MYPNQ86TC9 1320 aa19.22■□□□□ 0.67
CHMP3-202ENST00000393773 BCRP11274 1271 aa19.21■□□□□ 0.67
CHMP3-202ENST00000393773 GRK4P32298 578 aa19.21■□□□□ 0.67
CHMP3-202ENST00000393773 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
CHMP3-202ENST00000393773 GPAT2Q6NUI2 795 aa19.21■□□□□ 0.67
CHMP3-202ENST00000393773 UBE2Q1Q7Z7E8 422 aa19.21■□□□□ 0.67
CHMP3-202ENST00000393773 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
CHMP3-202ENST00000393773 CIAO1O76071 339 aa19.2■□□□□ 0.66
CHMP3-202ENST00000393773 LDHBP07195 334 aaKnown RBP19.2■□□□□ 0.66
CHMP3-202ENST00000393773 ZEB1P37275 1124 aaPredicted RBP19.2■□□□□ 0.66
CHMP3-202ENST00000393773 ZFPM1Q8IX07 1006 aa19.2■□□□□ 0.66
CHMP3-202ENST00000393773 RAET1EQ8TD07 263 aa19.2■□□□□ 0.66
CHMP3-202ENST00000393773 FBXO3Q9UK99 471 aa19.2■□□□□ 0.66
CHMP3-202ENST00000393773 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
CHMP3-202ENST00000393773 MAST2Q6P0Q8 1798 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 PHF20L1A8MW92 1017 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 ZBTB22O15209 634 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 FMNL1O95466 1100 aaPredicted RBP19.19■□□□□ 0.66
CHMP3-202ENST00000393773 PHKA1P46020 1223 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 PRKCZQ05513 592 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 SIL1Q9H173 461 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 USP40Q9NVE5 1235 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 GAKO14976 1311 aa19.19■□□□□ 0.66
CHMP3-202ENST00000393773 A0A0G2JLL6 359 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-202ENST00000393773 E9PSI1 815 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 SEMA3EO15041 775 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 CYP2C8P10632 490 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 CCL5P13501 91 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 GJA8P48165 433 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 RGS3P49796 1198 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 PRRT2Q7Z6L0 340 aaPredicted RBP19.18■□□□□ 0.66
CHMP3-202ENST00000393773 SCYL3Q8IZE3 742 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 IDI2Q9BXS1 227 aa19.18■□□□□ 0.66
CHMP3-202ENST00000393773 FOCADQ5VW36 1801 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms