RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 CCDC26Q8TAB7 109 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 XAGE3Q8WTP9 111 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 RAB21Q9UL25 225 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 ODF2LQ9ULJ1 636 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
TRA2A-202ENST00000392502 HSPA4P34932 840 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 BEND6Q5SZJ8 279 aaPredicted RBP18.66■□□□□ 0.58
TRA2A-202ENST00000392502 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 CNTROBQ8N137 903 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 DACT1Q9NYF0 836 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
TRA2A-202ENST00000392502 TBC1D8BQ0IIM8 1120 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 GNL2Q13823 731 aaKnown RBP18.65■□□□□ 0.58
TRA2A-202ENST00000392502 TUBB2AQ13885 445 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 TRIM65Q6PJ69 517 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 TUBB2BQ9BVA1 445 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 LSG1Q9H089 658 aaKnown RBP18.65■□□□□ 0.58
TRA2A-202ENST00000392502 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 MTMR6Q9Y217 621 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 TNS3Q68CZ2 1445 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 RTN2O75298 545 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 SASH1O94885 1247 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 DDX58O95786 925 aaKnown RBP18.65■□□□□ 0.58
TRA2A-202ENST00000392502 PPP2R3AQ06190 1150 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 CAMK4Q16566 473 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 CKAP2LQ8IYA6 745 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 IFNL2Q8IZJ0 200 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 CLASRPQ8N2M8 674 aaKnown RBP18.65■□□□□ 0.58
TRA2A-202ENST00000392502 ZNF483Q8TF39 744 aaPredicted RBP18.65■□□□□ 0.58
TRA2A-202ENST00000392502 PSMD1Q99460 953 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 VIPAS39Q9H9C1 493 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.586e-10■■■■□ 23.3
TRA2A-202ENST00000392502 FAM169AQ9Y6X4 670 aa18.65■□□□□ 0.58
TRA2A-202ENST00000392502 MRC1P22897 1456 aa18.64■□□□□ 0.58
TRA2A-202ENST00000392502 UTYO14607 1347 aa18.64■□□□□ 0.58
TRA2A-202ENST00000392502 A6NNZ2 444 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 PES1O00541 588 aaKnown RBP18.64■□□□□ 0.57
TRA2A-202ENST00000392502 COQ9O75208 318 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 LIG3P49916 1009 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 TUBB8Q3ZCM7 444 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 EPHA10Q5JZY3 1008 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 CPLX2Q6PUV4 134 aaKnown RBP18.64■□□□□ 0.57
TRA2A-202ENST00000392502 RASEFQ8IZ41 740 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 NAT10Q9H0A0 1025 aaKnown RBP18.64■□□□□ 0.57
TRA2A-202ENST00000392502 CCDC50Q8IVM0 306 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 AFAP1L1Q8TED9 768 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 SIL1Q9H173 461 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 CPSF2Q9P2I0 782 aaKnown RBP18.64■□□□□ 0.57
TRA2A-202ENST00000392502 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 MRFAP1Q9Y605 127 aa18.64■□□□□ 0.57
TRA2A-202ENST00000392502 NEURL1BA8MQ27 555 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 SHOX2O60902 331 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-202ENST00000392502 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
TRA2A-202ENST00000392502 PAX7P23759 505 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 TTC19Q6DKK2 380 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-202ENST00000392502 LRP10Q7Z4F1 713 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 KIAA1328Q86T90 577 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 AACSQ86V21 672 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 ZKSCAN4Q969J2 545 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-202ENST00000392502 ZSCAN31Q96LW9 406 aaPredicted RBP18.63■□□□□ 0.57
TRA2A-202ENST00000392502 MYD88Q99836 296 aa18.63■□□□□ 0.57
TRA2A-202ENST00000392502 FSBPO95073 299 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 SLC8A3P57103 927 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 MTA1Q13330 715 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 MAGEC3Q8TD91 643 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 TCP11Q8WWU5 503 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 BAG1Q99933 345 aaPredicted RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 ECHDC1Q9NTX5 307 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 TLR7Q9NYK1 1049 aaKnown RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 SNX14Q9Y5W7 946 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 IFIT2P09913 472 aaKnown RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 PRPHP41219 470 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 TTC6Q86TZ1 520 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 IQCA1Q86XH1 822 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 EAF2Q96CJ1 260 aaPredicted RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 LARP6Q9BRS8 491 aaKnown RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 CCDC8Q9H0W5 538 aaPredicted RBP18.62■□□□□ 0.57
TRA2A-202ENST00000392502 HOMER3Q9NSC5 361 aa18.62■□□□□ 0.57
TRA2A-202ENST00000392502 PDCP20941 246 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
TRA2A-202ENST00000392502 MSANTD4Q8NCY6 345 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 SH2B1Q9NRF2 756 aaPredicted RBP18.61■□□□□ 0.57
TRA2A-202ENST00000392502 ANO10Q9NW15 660 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 CPDO75976 1380 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 GCKRQ14397 625 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 MCM6Q14566 821 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 FBXW10Q5XX13 1052 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 BATF3Q9NR55 127 aa18.61■□□□□ 0.57
TRA2A-202ENST00000392502 CPA1P15085 419 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 PTH1RQ03431 593 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 PLCB4Q15147 1175 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 RCSD1Q6JBY9 416 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 B4GALNT4Q76KP1 1039 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
TRA2A-202ENST00000392502 FAM204AQ9H8W3 233 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms