RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 ZNF605Q86T29 641 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 ALDH16A1Q8IZ83 802 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 PHTF2Q8N3S3 785 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 SLC7A3Q8WY07 619 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 CHFRQ96EP1 664 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 SPACA7Q96KW9 195 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 CARS2Q9HA77 564 aaKnown RBP1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 SH2B1Q9NRF2 756 aaPredicted RBP1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 FAM105AQ9NUU6 356 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 HS3ST3A1Q9Y663 406 aa1.34□□□□□ -2.19
RNU6-604P-201ENST00000390917 LTBP3Q9NS15 1303 aa1.34□□□□□ -2.2
RNU6-604P-201ENST00000390917 XYLBO75191 536 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 HYAL2Q12891 473 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 ADAMTSL4Q6UY14 1074 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 SPACA3Q8IXA5 215 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 PANK1Q8TE04 598 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 MYLIPQ8WY64 445 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 KISS1RQ969F8 398 aaPredicted RBP1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 SHISA4Q96DD7 197 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 USP40Q9NVE5 1235 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 TSC22D4Q9Y3Q8 395 aa1.33□□□□□ -2.2
RNU6-604P-201ENST00000390917 EIF4EBP3O60516 100 aaPredicted RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 DLGAP3O95886 979 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 FBLP22087 321 aaKnown RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 KCNC1P48547 511 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 CDK5R2Q13319 367 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 VMACQ2NL98 169 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 EML3Q32P44 896 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 HP1BP3Q5SSJ5 553 aaPredicted RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 ZNF362Q5T0B9 420 aaPredicted RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 TNS4Q8IZW8 715 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 LOXL4Q96JB6 756 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 ALPK1Q96QP1 1244 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 CEP89Q96ST8 783 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 KRTAP1-5Q9BYS1 174 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 PBX4Q9BYU1 374 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 RASSF4Q9H2L5 321 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 GSX1Q9H4S2 264 aaPredicted RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 SOX17Q9H6I2 414 aaPredicted RBP1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 BCS1LQ9Y276 419 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 PCDHGA11Q9Y5H2 935 aa1.32□□□□□ -2.2
RNU6-604P-201ENST00000390917 PSME1Q06323 249 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 GPR162Q16538 588 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 DYMQ7RTS9 669 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 NPAS4Q8IUM7 802 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 STAG2Q8N3U4 1231 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 GJD4Q96KN9 370 aaPredicted RBP1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 SGPP1Q9BX95 441 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 RNF32Q9H0A6 362 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 TSPAN10Q9H1Z9 355 aaPredicted RBP1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 ZNF552Q9H707 407 aaPredicted RBP1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 AP4E1Q9UPM8 1137 aa1.31□□□□□ -2.2
RNU6-604P-201ENST00000390917 HPXP02790 462 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 ASPAP45381 313 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 EPHA10Q5JZY3 1008 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 CNKSR3Q6P9H4 555 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 AMER2Q8N7J2 671 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 PLPP7Q8NBV4 271 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 CHST13Q8NET6 341 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 OR13H1Q8NG92 308 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 SPATA3Q8NHX4 192 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 NGLY1Q96IV0 654 aa1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 CDK5RAP1Q96SZ6 601 aaKnown RBP1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 RBM15Q96T37 977 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 EPB41L4AQ9HCS5 686 aaPredicted RBP1.3□□□□□ -2.2
RNU6-604P-201ENST00000390917 HRKO00198 91 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 IRS4O14654 1257 aaPredicted RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 PPP1R12BO60237 982 aaPredicted RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 KIF4AO95239 1232 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 ZC3H6P61129 1189 aaKnown RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 KRTAP15-1Q3LI76 137 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 COL13A1Q5TAT6 717 aaPredicted RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 TTC6Q86TZ1 520 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 FERMT3Q86UX7 667 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 NLRP13Q86W25 1043 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 TREML1Q86YW5 311 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 TP53I13Q8NBR0 393 aaPredicted RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 ZG16BQ96DA0 208 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 INTS4Q96HW7 963 aaKnown RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 POP1Q99575 1024 aaKnown RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 DUSP23Q9BVJ7 150 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 LGR6Q9HBX8 967 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 CWC22Q9HCG8 908 aaKnown RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 SLAMF8Q9P0V8 285 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 GTF2IRD1Q9UHL9 959 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 SOX13Q9UN79 622 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 RTCBQ9Y3I0 505 aaKnown RBP1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 SALL3Q9BXA9 1300 aa1.29□□□□□ -2.2
RNU6-604P-201ENST00000390917 IGF2BP3O00425 579 aaKnown RBP eCLIP1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 N4BP3O15049 544 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 GPR37L1O60883 481 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 LEFTY1O75610 366 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 POU3F3P20264 500 aaPredicted RBP1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 CNR2P34972 360 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 EPHB3P54753 998 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 SLURP1P55000 103 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 INHBCP55103 352 aa1.28□□□□□ -2.2
RNU6-604P-201ENST00000390917 EIF4G2P78344 907 aaKnown RBP eCLIP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms