RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 DUSP9Q99956 384 aaKnown RBP4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 WDR18Q9BV38 432 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 USP26Q9BXU7 913 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 CEP44Q9C0F1 390 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 RNF19AQ9NV58 838 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 PARP2Q9UGN5 583 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 USP31Q70CQ4 1352 aa4.22□□□□□ -1.73
RNU6-541P-201ENST00000384709 SCO2A0A1W2PP80 73 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 GSC2O15499 205 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 DHX15O43143 795 aaKnown RBP4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 ZNF862O60290 1169 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 AOC2O75106 756 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 ECEL1O95672 775 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 GSTP1P09211 210 aaKnown RBP4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 CTSHP09668 335 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 ADH5P11766 374 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 ST13P50502 369 aaKnown RBP4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 PRSS36Q5K4E3 855 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 NUTM2GQ5VZR2 741 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 STK35Q8TDR2 534 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 FAM83CQ9BQN1 747 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 CORO1BQ9BR76 489 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 EMILIN2Q9BXX0 1053 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 SEMA6BQ9H3T3 888 aa4.21□□□□□ -1.74
RNU6-541P-201ENST00000384709 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 TMPRSS2O15393 492 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 TRIM37O94972 964 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 RPS26P62854 115 aaKnown RBP4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 RING1Q06587 406 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 TMCO4Q5TGY1 634 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 FDX2Q6P4F2 183 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 SEZ6L2Q6UXD5 910 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 CCDC86Q9H6F5 360 aaKnown RBP4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 CRIM1Q9NZV1 1036 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 GPN3Q9UHW5 284 aaPredicted RBP4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 CYP8B1Q9UNU6 501 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 AKAP2Q9Y2D5 859 aa4.2□□□□□ -1.74
RNU6-541P-201ENST00000384709 FSTP19883 344 aa4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 ITGAEP38570 1179 aa4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 TAGLNQ01995 201 aaKnown RBP4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 MRPL58Q14197 206 aaKnown RBP4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 SULF2Q8IWU5 870 aa4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 UTP4Q969X6 686 aaKnown RBP4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 WDR89Q96FK6 387 aaPredicted RBP4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 NOC4LQ9BVI4 516 aaKnown RBP4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 ACSS3Q9H6R3 686 aa4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 ACTL7BQ9Y614 415 aa4.19□□□□□ -1.74
RNU6-541P-201ENST00000384709 PAGE1O75459 146 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 IGLV1-40P01703 118 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 BMP3P12645 472 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 DRD2P14416 443 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 LIG1P18858 919 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 ZNF157P51786 506 aaPredicted RBP4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 MFAP1P55081 439 aaKnown RBP4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 HNRNPUQ00839 825 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 LRRC14Q15048 493 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 ZC3H12AQ5D1E8 599 aaKnown RBP4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 RASIP1Q5U651 963 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 RNF43Q68DV7 783 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 CDPF1Q6NVV7 123 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 TPTE2Q6XPS3 522 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 NBPF11Q86T75 865 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 C12orf50Q8NA57 414 aaPredicted RBP4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 GATA6Q92908 595 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 C7orf69Q9H7B7 122 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 ZFP64Q9NPA5 681 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 STOML1Q9UBI4 398 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 PPP1R9AQ9ULJ8 1098 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 RNF112Q9ULX5 631 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 SAMM50Q9Y512 469 aa4.18□□□□□ -1.74
RNU6-541P-201ENST00000384709 RBM47A0AV96 593 aaKnown RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 SART1O43290 800 aaKnown RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 SORBS3O60504 671 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 CELA3AP09093 270 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 SLFN14P0C7P3 912 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 MAP4P27816 1152 aaKnown RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 ERVK-24P63145 666 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 XPCQ01831 940 aaPredicted RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 NFIAQ12857 509 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 TRIM26Q12899 539 aaPredicted RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 PSMD2Q13200 908 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 TAF1CQ15572 869 aaPredicted RBP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 CPSF6Q16630 551 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 SGO2Q562F6 1265 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 AGMOQ6ZNB7 445 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 BEND4Q6ZU67 534 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 ZDHHC13Q8IUH4 622 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 CRELD1Q96HD1 420 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 FANCD2OSQ96PS1 177 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 DBNDD2Q9BQY9 259 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 DISC1Q9NRI5 854 aa4.17□□□□□ -1.74
RNU6-541P-201ENST00000384709 PRR19A6NJB7 356 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 GAS2O43903 313 aaKnown RBP4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 RLBP1P12271 317 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 VAMP1P23763 118 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 ID3Q02535 119 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 PDE3AQ14432 1141 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 AKAP4Q5JQC9 854 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 ARTNQ5T4W7 220 aa4.16□□□□□ -1.74
RNU6-541P-201ENST00000384709 LDLRAD1Q5T700 205 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms