RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CREB3L3Q68CJ9 461 aa24.4■■□□□ 1.5
TSSC4-203ENST00000380996 SERPINA10Q9UK55 444 aa24.4■■□□□ 1.5
TSSC4-203ENST00000380996 HDAC9Q9UKV0 1011 aa24.4■■□□□ 1.5
TSSC4-203ENST00000380996 DAGLAQ9Y4D2 1042 aa24.4■■□□□ 1.5
TSSC4-203ENST00000380996 GRIN3BO60391 1043 aa24.39■■□□□ 1.49
TSSC4-203ENST00000380996 SCNN1DP51172 638 aa24.39■■□□□ 1.49
TSSC4-203ENST00000380996 FOXP2O15409 715 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 FGAP02671 866 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 MMP14P50281 582 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 IFNL3Q8IZI9 196 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 OGFOD1Q8N543 542 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 KCNB2Q92953 911 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 DDRGK1Q96HY6 314 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 GMLQ99445 158 aa24.38■■□□□ 1.49
TSSC4-203ENST00000380996 GOLGB1Q14789 3259 aaKnown RBP24.37■■□□□ 1.49
TSSC4-203ENST00000380996 GSG1L2A8MUP6 293 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 SLC27A2O14975 620 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 RPS12P25398 132 aaKnown RBP24.37■■□□□ 1.49
TSSC4-203ENST00000380996 ANP32AP39687 249 aaKnown RBP24.37■■□□□ 1.49
TSSC4-203ENST00000380996 CRKP46108 304 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 GIMAP6Q6P9H5 292 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 ZDHHC15Q96MV8 337 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 NAPBQ9H115 298 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 ZMYM6O95789 1325 aa24.37■■□□□ 1.49
TSSC4-203ENST00000380996 PRKAB2O43741 272 aa24.36■■□□□ 1.49
TSSC4-203ENST00000380996 IMMTQ16891 758 aaKnown RBP24.36■■□□□ 1.49
TSSC4-203ENST00000380996 IL17RAQ96F46 866 aa24.36■■□□□ 1.49
TSSC4-203ENST00000380996 ATP8A2Q9NTI2 1148 aa24.36■■□□□ 1.49
TSSC4-203ENST00000380996 TDO2P48775 406 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 RBM5P52756 815 aaKnown RBP eCLIP24.35■■□□□ 1.49
TSSC4-203ENST00000380996 PALD1Q9ULE6 856 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 ZBTB12Q9Y330 459 aaPredicted RBP24.35■■□□□ 1.49
TSSC4-203ENST00000380996 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 USP17L8P0C7I0 530 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 KRT32Q14532 448 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 TSGA10IPQ3SY00 556 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 SH3RF3Q8TEJ3 882 aaPredicted RBP24.35■■□□□ 1.49
TSSC4-203ENST00000380996 SDR42E1Q8WUS8 393 aa24.35■■□□□ 1.49
TSSC4-203ENST00000380996 PSME4Q14997 1843 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 USP5P45974 858 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 RABEP1Q15276 862 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 RASEFQ8IZ41 740 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 KIF2CQ99661 725 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 EPB41L4AQ9HCS5 686 aaPredicted RBP24.34■■□□□ 1.49
TSSC4-203ENST00000380996 RNF181Q9P0P0 153 aa24.34■■□□□ 1.49
TSSC4-203ENST00000380996 ZNF213O14771 459 aa24.33■■□□□ 1.49
TSSC4-203ENST00000380996 CYP21A2P08686 494 aa24.33■■□□□ 1.49
TSSC4-203ENST00000380996 APOBEC3HQ6NTF7 200 aaKnown RBP24.33■■□□□ 1.49
TSSC4-203ENST00000380996 TEX11Q8IYF3 940 aa24.33■■□□□ 1.49
TSSC4-203ENST00000380996 RHBDL3P58872 404 aa24.32■■□□□ 1.48
TSSC4-203ENST00000380996 IL27Q8NEV9 243 aa24.32■■□□□ 1.48
TSSC4-203ENST00000380996 DPF2Q92785 391 aa24.32■■□□□ 1.48
TSSC4-203ENST00000380996 GJA3Q9Y6H8 435 aa24.32■■□□□ 1.48
TSSC4-203ENST00000380996 MYH2Q9UKX2 1941 aa24.32■■□□□ 1.48
TSSC4-203ENST00000380996 ZNF646O15015 1829 aaPredicted RBP24.32■■□□□ 1.48
TSSC4-203ENST00000380996 PSMA5P28066 241 aa24.31■■□□□ 1.48
TSSC4-203ENST00000380996 CFAP100Q494V2 611 aa24.31■■□□□ 1.48
TSSC4-203ENST00000380996 DCP1AQ9NPI6 582 aaPredicted RBP24.31■■□□□ 1.48
TSSC4-203ENST00000380996 USP40Q9NVE5 1235 aa24.31■■□□□ 1.48
TSSC4-203ENST00000380996 C9orf131Q5VYM1 1079 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 ZNF541Q9H0D2 1346 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 DLGAP5Q15398 846 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 GPC2Q8N158 579 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 TGFBRAP1Q8WUH2 860 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 TM6SF1Q9BZW5 370 aa24.3■■□□□ 1.48
TSSC4-203ENST00000380996 GMPSP49915 693 aaPredicted RBP24.29■■□□□ 1.48
TSSC4-203ENST00000380996 CDC42EP5Q6NZY7 148 aa24.29■■□□□ 1.48
TSSC4-203ENST00000380996 AMOTL1Q8IY63 956 aa24.29■■□□□ 1.48
TSSC4-203ENST00000380996 HAND2P61296 217 aa24.28■■□□□ 1.48
TSSC4-203ENST00000380996 MTMR14Q8NCE2 650 aa24.28■■□□□ 1.48
TSSC4-203ENST00000380996 JAKMIP1Q96N16 626 aaKnown RBP24.28■■□□□ 1.48
TSSC4-203ENST00000380996 ARPP21Q9UBL0 812 aaPredicted RBP24.28■■□□□ 1.48
TSSC4-203ENST00000380996 ZNF280AP59817 542 aaPredicted RBP24.27■■□□□ 1.48
TSSC4-203ENST00000380996 SBK1Q52WX2 424 aa24.27■■□□□ 1.48
TSSC4-203ENST00000380996 MCM9Q9NXL9 1143 aa24.27■■□□□ 1.48
TSSC4-203ENST00000380996 MKRN1Q9UHC7 482 aaKnown RBP24.27■■□□□ 1.48
TSSC4-203ENST00000380996 DCAF8L1A6NGE4 600 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 SPDYE2BA6NHP3 402 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 USP17L12C9JPN9 530 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 USP17L21D6R901 530 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 SPDYE6P0CI01 402 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 CTR9Q6PD62 1173 aa24.26■■□□□ 1.47
TSSC4-203ENST00000380996 MINDY4BA8MYZ0 360 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 E7EWF7 191 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 ST18O60284 1047 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 HMGB1P09429 215 aaKnown RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 CASTP20810 708 aaKnown RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 PPARAQ07869 468 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 ADCK5Q3MIX3 580 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 MAPKAPK5Q8IW41 473 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 PRMT6Q96LA8 375 aaPredicted RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 NEK1Q96PY6 1258 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 MYOZ2Q9NPC6 264 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 TMOD2Q9NZR1 351 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 ANAPC4Q9UJX5 808 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 CYP46A1Q9Y6A2 500 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 TAF6LQ9Y6J9 622 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 FLT1P17948 1338 aa24.25■■□□□ 1.47
TSSC4-203ENST00000380996 ZC3H4Q9UPT8 1303 aaKnown RBP24.25■■□□□ 1.47
TSSC4-203ENST00000380996 WDHD1O75717 1129 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms