RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 FKBP15Q5T1M5 1219 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 CEP135Q66GS9 1140 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 MTIF2P46199 727 aaKnown RBP20.32■□□□□ 0.84
UBL3-201ENST00000380680 GYG1P46976 350 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
UBL3-201ENST00000380680 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 ZNF397Q8NF99 534 aaPredicted RBP20.32■□□□□ 0.84
UBL3-201ENST00000380680 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 ADCY9O60503 1353 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 KIF5CO60282 957 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 STAT6P42226 847 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 PATL2C9JE40 543 aaKnown RBP20.32■□□□□ 0.84
UBL3-201ENST00000380680 H7C1W4 665 aa20.32■□□□□ 0.84
UBL3-201ENST00000380680 MAST3O60307 1309 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 MCM7P33993 719 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
UBL3-201ENST00000380680 STX17P56962 302 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 AMPD3Q01432 767 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 SCRN1Q12765 414 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 SPECC1Q5M775 1068 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 ELP1O95163 1332 aa20.31■□□□□ 0.84
UBL3-201ENST00000380680 CCDC181Q5TID7 509 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 hCG_1642624A0A1W2PR95 340 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 CRKLP46109 303 aaKnown RBP20.3■□□□□ 0.84
UBL3-201ENST00000380680 UBA5Q9GZZ9 404 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 PDIA3P30101 505 aaKnown RBP20.3■□□□□ 0.84
UBL3-201ENST00000380680 ZNF174Q15697 407 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 IFNL3Q8IZI9 196 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 KCNJ14Q9UNX9 436 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 DYNC1I1O14576 645 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 NR1I2O75469 434 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 MYSM1Q5VVJ2 828 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
UBL3-201ENST00000380680 ZNF202O95125 648 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 KCNH3Q9ULD8 1083 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 UFL1O94874 794 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 OSBP2Q969R2 916 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 SAP30BPQ9UHR5 308 aaKnown RBP20.29■□□□□ 0.84
UBL3-201ENST00000380680 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 VWA3AA6NCI4 1184 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 YEATS4O95619 227 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 PLCG2P16885 1265 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 CASQ1P31415 396 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 GNG11P61952 73 aa20.29■□□□□ 0.84
UBL3-201ENST00000380680 PPLO60437 1756 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 RIMBP3CA6NJZ7 1639 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 RIMBP3BA6NNM3 1639 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 RIMBP3Q9UFD9 1639 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 NRKQ7Z2Y5 1582 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 SDR42E1Q8WUS8 393 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 TSG101Q99816 390 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 SPA17Q15506 151 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 ENOX2Q16206 610 aaKnown RBP20.28■□□□□ 0.84
UBL3-201ENST00000380680 TEX11Q8IYF3 940 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 SEC31BQ9NQW1 1179 aa20.28■□□□□ 0.84
UBL3-201ENST00000380680 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 NEURL4Q96JN8 1562 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 SYCP1Q15431 976 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 ZFYVE27Q5T4F4 411 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 C17orf53Q8N3J3 647 aaPredicted RBP20.27■□□□□ 0.84
UBL3-201ENST00000380680 RBM28Q9NW13 759 aaKnown RBP20.27■□□□□ 0.84
UBL3-201ENST00000380680 TECPR2O15040 1411 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 USP17L12C9JPN9 530 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 USP17L21D6R901 530 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 ERLIN1O75477 346 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 RMND1Q9NWS8 449 aa20.27■□□□□ 0.84
UBL3-201ENST00000380680 KCNQ4P56696 695 aa20.27■□□□□ 0.83
UBL3-201ENST00000380680 MYL5Q02045 173 aa20.27■□□□□ 0.83
UBL3-201ENST00000380680 CHRNDQ07001 517 aa20.27■□□□□ 0.83
UBL3-201ENST00000380680 CMTR1Q8N1G2 835 aaKnown RBP20.27■□□□□ 0.83
UBL3-201ENST00000380680 CUL5Q93034 780 aa20.27■□□□□ 0.83
UBL3-201ENST00000380680 PAXBP1Q9Y5B6 917 aa20.27■□□□□ 0.83
UBL3-201ENST00000380680 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
UBL3-201ENST00000380680 CD163L1Q9NR16 1453 aa20.26■□□□□ 0.83
UBL3-201ENST00000380680 POLR2DO15514 142 aaKnown RBP20.26■□□□□ 0.83
UBL3-201ENST00000380680 TMCO3Q6UWJ1 677 aa20.26■□□□□ 0.83
UBL3-201ENST00000380680 IQUBQ8NA54 791 aa20.26■□□□□ 0.83
UBL3-201ENST00000380680 C6orf50Q9HD87 102 aa20.26■□□□□ 0.83
UBL3-201ENST00000380680 FGFR1OPO95684 399 aaKnown RBP20.25■□□□□ 0.83
UBL3-201ENST00000380680 CBX1P83916 185 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 PLIN2Q99541 437 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 DNAI1Q9UI46 699 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 TMEM131LA2VDJ0 1609 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 MROH1Q8NDA8 1641 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 M0R2C6 588 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 TXLNBQ8N3L3 684 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 PPARAQ07869 468 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 HLFQ16534 295 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 PDCL3Q9H2J4 239 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 EXOC1Q9NV70 894 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 ZNF654Q8IZM8 581 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 WDR66Q8TBY9 1149 aa20.25■□□□□ 0.83
UBL3-201ENST00000380680 PUS7LQ9H0K6 701 aaKnown RBP20.25■□□□□ 0.83
UBL3-201ENST00000380680 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
UBL3-201ENST00000380680 TTLL11Q8NHH1 800 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 PPP1R9BQ96SB3 815 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms