RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 PHLDB2Q86SQ0 1253 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 RPL13P26373 211 aaKnown RBP19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 COMMD10Q9Y6G5 202 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 TBC1D8BQ0IIM8 1120 aa19.15■□□□□ 0.66
COL4A3BP-203ENST00000380494 CFAP221Q4G0U5 840 aa19.14■□□□□ 0.66
COL4A3BP-203ENST00000380494 BICD1Q96G01 975 aa19.14■□□□□ 0.66
COL4A3BP-203ENST00000380494 ZBTB3Q9H5J0 574 aa19.14■□□□□ 0.66
COL4A3BP-203ENST00000380494 NDC80O14777 642 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 ERCC6LQ2NKX8 1250 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 CNNM4Q6P4Q7 775 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 RNF10Q8N5U6 811 aaKnown RBP19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 RAB3IPQ96QF0 476 aaPredicted RBP19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 E7EVH7 732 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 HLA-DOAP06340 250 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 PAK1Q13153 545 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 COL17A1Q9UMD9 1497 aaPredicted RBP19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 EEF2P13639 858 aaKnown RBP19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 MRFAP1L1Q96HT8 127 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 USH1CQ9Y6N9 552 aa19.14■□□□□ 0.65
COL4A3BP-203ENST00000380494 CFAP157Q5JU67 520 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 RAB3IL1Q8TBN0 382 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 IBTKQ9P2D0 1353 aaPredicted RBP19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 CYP7A1P22680 504 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 MCM7P33993 719 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 RASSF2P50749 326 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 ZC3H6P61129 1189 aaKnown RBP19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 LINS1Q8NG48 757 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 CAPN7Q9Y6W3 813 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
COL4A3BP-203ENST00000380494 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 ZNF202O95125 648 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 SV2BQ7L1I2 683 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 APBB1IPQ7Z5R6 666 aaPredicted RBP19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 CASQ2O14958 399 aaPredicted RBP19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 LUC7L3O95232 432 aaKnown RBP19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 GNA11P29992 359 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 SND1Q7KZF4 910 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 UBL4BQ8N7F7 174 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 WWC3Q9ULE0 1092 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 HS2ST1Q7LGA3 356 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 CEP120Q8N960 986 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 RGS22Q8NE09 1264 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 MCUR1Q96AQ8 359 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 RRP36Q96EU6 259 aaKnown RBP19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 TMEM87BQ96K49 555 aa19.12■□□□□ 0.65
COL4A3BP-203ENST00000380494 ZPR1O75312 459 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 DEXIO95424 95 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 CCDC62Q6P9F0 684 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 SYCE1Q8N0S2 351 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 BANK1Q8NDB2 785 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 VPS16Q9H269 839 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 TCOF1Q13428 1488 aaKnown RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 SGSM2O43147 1006 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 ASIC2Q16515 512 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 PNMA8AQ86V59 439 aaPredicted RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 PSDA5PKW4 1024 aaPredicted RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 TPD52P55327 224 aaPredicted RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 APBA1Q02410 837 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 VSIG1Q86XK7 387 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 ADGRL1O94910 1474 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 DUOX2Q9NRD8 1548 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 CCDC14Q49A88 953 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 GKAP1Q5VSY0 366 aaPredicted RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 PABPN1LA6NDY0 278 aaKnown RBP19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 GNGT1P63211 74 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 CCDC152Q4G0S7 254 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 SH2D4BQ5SQS7 431 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 CCDC65Q8IXS2 484 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 MSANTD4Q8NCY6 345 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 FAM184BQ9ULE4 1060 aa19.11■□□□□ 0.65
COL4A3BP-203ENST00000380494 LRRC8AQ8IWT6 810 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 PARP2Q9UGN5 583 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 SAMM50Q9Y512 469 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 FAM13AO94988 1023 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 PLCB3Q01970 1234 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 NUCKS1Q9H1E3 243 aaKnown RBP19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 CAPS2Q9BXY5 557 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 PPP1R12CQ9BZL4 782 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 TM6SF1Q9BZW5 370 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 MTX1Q13505 466 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 IMPG2Q9BZV3 1241 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 PHF8Q9UPP1 1060 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 SAR1BQ9Y6B6 198 aa19.1■□□□□ 0.65
COL4A3BP-203ENST00000380494 SLC9C1Q4G0N8 1177 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 CABP5Q9NP86 173 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 PSMC4P43686 418 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 EFCAB13Q8IY85 973 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 TXNDC16Q9P2K2 825 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 EPB41P11171 864 aaKnown RBP19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 ZNF215Q9UL58 517 aaPredicted RBP19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
COL4A3BP-203ENST00000380494 MAGEB6P1A0A0J9YX57 407 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms