RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 COPS6Q7L5N1 327 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 EHBP1Q8NDI1 1231 aa13.93□□□□□ -0.18
CHD3-203ENST00000380358 PRPF6O94906 941 aaKnown RBP13.92□□□□□ -0.18
CHD3-203ENST00000380358 CAPN2P17655 700 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
CHD3-203ENST00000380358 SYNDIG1LA6NDD5 238 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 LMBR1Q8WVP7 490 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 PDCD7Q8N8D1 485 aaKnown RBP13.92□□□□□ -0.18
CHD3-203ENST00000380358 APOL6Q9BWW8 343 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 SAMD15Q9P1V8 674 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 RABGAP1Q9Y3P9 1069 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 TNFAIP3P21580 790 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
CHD3-203ENST00000380358 STMN4Q9H169 189 aaPredicted RBP13.92□□□□□ -0.18
CHD3-203ENST00000380358 SWAP70Q9UH65 585 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 SKILP12757 684 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 DDB1Q16531 1140 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
CHD3-203ENST00000380358 CCDC184Q52MB2 194 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 HP1BP3Q5SSJ5 553 aaPredicted RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 CASQ2O14958 399 aaPredicted RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 RPS6KA2Q15349 733 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 ZCRB1Q8TBF4 217 aaKnown RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 TTC14Q96N46 770 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 SMIM24O75264 130 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 EPB41P11171 864 aaKnown RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 IGBP1P78318 339 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 RILPQ96NA2 401 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 MRPL46Q9H2W6 279 aaKnown RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 RBBP5Q15291 538 aaKnown RBP13.91□□□□□ -0.18
CHD3-203ENST00000380358 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
CHD3-203ENST00000380358 STK10O94804 968 aaKnown RBP13.9□□□□□ -0.18
CHD3-203ENST00000380358 PARP1P09874 1014 aaKnown RBP13.9□□□□□ -0.18
CHD3-203ENST00000380358 NSMFQ6X4W1 530 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 MTRF1LQ9UGC7 380 aaKnown RBP13.9□□□□□ -0.18
CHD3-203ENST00000380358 UFL1O94874 794 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 VPS16Q9H269 839 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 OPA1O60313 960 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 PYM1Q9BRP8 204 aaKnown RBP13.9□□□□□ -0.18
CHD3-203ENST00000380358 SNRPA1P09661 255 aaKnown RBP13.9□□□□□ -0.18
CHD3-203ENST00000380358 DCUN1D2Q6PH85 259 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
CHD3-203ENST00000380358 BICDL2A1A5D9 508 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 PCK1P35558 622 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 GADL1Q6ZQY3 521 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 NKIRAS1Q9NYS0 192 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 FBXW4P57775 412 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 ACBD5Q5T8D3 534 aaPredicted RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 SCYL1Q96KG9 808 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 CDR2Q01850 454 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 MMS19Q96T76 1030 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 BNIP3LO60238 219 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 MX2P20592 715 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 TXKP42681 527 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 SLC12A2P55011 1212 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 ARPP19P56211 112 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 TBC1D10BQ4KMP7 808 aaPredicted RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
CHD3-203ENST00000380358 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
CHD3-203ENST00000380358 TBC1D8O95759 1140 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 DYMQ7RTS9 669 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 MYLK4Q86YV6 388 aaPredicted RBP13.88□□□□□ -0.19
CHD3-203ENST00000380358 CALML3P27482 149 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 SMTNP53814 917 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 TEX11Q8IYF3 940 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 RBM8AQ9Y5S9 174 aaKnown RBP13.88□□□□□ -0.19
CHD3-203ENST00000380358 AZI2Q9H6S1 392 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 YARSP54577 528 aaKnown RBP13.88□□□□□ -0.19
CHD3-203ENST00000380358 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 ARHGAP44Q17R89 818 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 C10orf67Q8IYJ2 551 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 LRRC59Q96AG4 307 aaKnown RBP13.88□□□□□ -0.19
CHD3-203ENST00000380358 hCG_1642624A0A1W2PR95 340 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 TRIM75PA6NK02 468 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 KRT86O43790 486 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 GANCQ8TET4 914 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 SMYD2Q9NRG4 433 aa13.88□□□□□ -0.19
CHD3-203ENST00000380358 INPP1P49441 399 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
CHD3-203ENST00000380358 GSTA1P08263 222 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms