RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 ERLIN1O75477 346 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 RBBP5Q15291 538 aaKnown RBP12.37□□□□□ -0.43
ITSN1-201ENST00000379960 STX1AQ16623 288 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 DHX58Q96C10 678 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
ITSN1-201ENST00000379960 PRAMEF22A3QJZ6 481 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 SNUPNO95149 360 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 CPA1P15085 419 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 KCNJ6P48051 423 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 CDC37L1Q7L3B6 337 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 HNRNPLLQ8WVV9 542 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 PSMD1Q99460 953 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 XPO4Q9C0E2 1151 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 PDE1AP54750 535 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 AMOTQ4VCS5 1084 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 EHD4Q9H223 541 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 BTG4Q9NY30 223 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 IFNKQ9P0W0 207 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
ITSN1-201ENST00000379960 SAMM50Q9Y512 469 aa12.36□□□□□ -0.43
ITSN1-201ENST00000379960 ENO4A6NNW6 628 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 NAP1L1P55209 391 aaKnown RBP12.35□□□□□ -0.43
ITSN1-201ENST00000379960 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 C1QTNF12Q5T7M4 302 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 TRIM74Q86UV6 250 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 TRIM73Q86UV7 250 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 DDX54Q8TDD1 881 aaKnown RBP12.35□□□□□ -0.43
ITSN1-201ENST00000379960 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
ITSN1-201ENST00000379960 PRDM16Q9HAZ2 1276 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 COQ9O75208 318 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 FNTAP49354 379 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 ABCC4O15439 1325 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 VWA3AA6NCI4 1184 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
ITSN1-201ENST00000379960 WDHD1O75717 1129 aaPredicted RBP12.35□□□□□ -0.43
ITSN1-201ENST00000379960 WLSQ5T9L3 541 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 KLHL23Q8NBE8 558 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
ITSN1-201ENST00000379960 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 CHMLP26374 656 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 CEP85LQ5SZL2 805 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 LEO1Q8WVC0 666 aaPredicted RBP12.34□□□□□ -0.43
ITSN1-201ENST00000379960 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 KAT14Q9H8E8 782 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 CYP27B1O15528 508 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 ICA1Q05084 483 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 TBC1D25Q3MII6 688 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
ITSN1-201ENST00000379960 SPDL1Q96EA4 605 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 TEX13AQ9BXU3 409 aaPredicted RBP12.34□□□□□ -0.43
ITSN1-201ENST00000379960 IL25Q9H293 177 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
ITSN1-201ENST00000379960 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
ITSN1-201ENST00000379960 RPSAP08865 295 aaKnown RBP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 USP5P45974 858 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 GOLGA8FQ08AF8 430 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 GOLGA8DPQ0D2H9 430 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 HDGFL1Q5TGJ6 251 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 ANKRD44Q8N8A2 993 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 IGSF22Q8N9C0 903 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 RIN2Q8WYP3 895 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 TTC14Q96N46 770 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 STK31Q9BXU1 1019 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 CPDO75976 1380 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 VSNL1P62760 191 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 MTA1Q13330 715 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 PHAXQ9H814 394 aaKnown RBP12.33□□□□□ -0.44
ITSN1-201ENST00000379960 ABCA3Q99758 1704 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
ITSN1-201ENST00000379960 UBAP1LF5GYI3 381 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 PYGLP06737 847 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 AMOTL1Q8IY63 956 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
ITSN1-201ENST00000379960 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-201ENST00000379960 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 G3BP2Q9UN86 482 aaKnown RBP12.32□□□□□ -0.44
ITSN1-201ENST00000379960 SPG7Q9UQ90 795 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
ITSN1-201ENST00000379960 LRRC37A3O60309 1634 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 KIAA0754O94854 1291 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 PHKG2P15735 406 aa12.32□□□□□ -0.44
ITSN1-201ENST00000379960 HSPA4P34932 840 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms