RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 UBXN4Q92575 508 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 POLR3EQ9NVU0 708 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 ARGLU1Q9NWB6 273 aaPredicted RBP19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 DENND2AQ9ULE3 1009 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 KIF28PB7ZC32 967 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 TULP2O00295 520 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 TMCO3Q6UWJ1 677 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 SYNE3Q6ZMZ3 975 aa19.17■□□□□ 0.66
PCDHA1-201ENST00000378133 BIN1O00499 593 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 NKX1-1Q15270 411 aaPredicted RBP19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 SECISBP2LQ93073 1101 aaKnown RBP19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 AHDC1Q5TGY3 1603 aaPredicted RBP19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 YEATS4O95619 227 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 KCNJ6P48051 423 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 CERS3Q8IU89 383 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 TEX35Q5T0J7 233 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 DNAI1Q9UI46 699 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 FBXO3Q9UK99 471 aa19.16■□□□□ 0.66
PCDHA1-201ENST00000378133 PARP4Q9UKK3 1724 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 ZNF202O95125 648 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 IL2RBP14784 551 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 ETF1P62495 437 aaKnown RBP19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 NKX2-3Q8TAU0 364 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 UBR2Q8IWV8 1755 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 ZRANB2O95218 330 aaKnown RBP eCLIP19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 CSF1RP07333 972 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 CAPN2P17655 700 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 MCAMP43121 646 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 METTL24Q5JXM2 366 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 BRAPQ7Z569 592 aa19.15■□□□□ 0.66
PCDHA1-201ENST00000378133 NEDD4P46934 1319 aa19.14■□□□□ 0.66
PCDHA1-201ENST00000378133 POLR3GO15318 223 aaPredicted RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 SLC3A2P08195 630 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 TPM4P67936 248 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 KIF23Q02241 960 aaPredicted RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 DHX8Q14562 1220 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 ANO1Q5XXA6 986 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 RXRAP19793 462 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 MARCKSP29966 332 aaPredicted RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 LDHAL6AQ6ZMR3 332 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 MNS1Q8NEH6 495 aa19.14■□□□□ 0.65
PCDHA1-201ENST00000378133 TEX2Q8IWB9 1127 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 BPIFA3Q9BQP9 254 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 NBPF3Q9H094 633 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 STRN4Q9NRL3 753 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 GPTP24298 496 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 SLC20A2Q08357 652 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 TRDNQ13061 729 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 AXDND1Q5T1B0 1012 aaPredicted RBP19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 ISM2Q6H9L7 571 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 DNAJC10Q8IXB1 793 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 RIPOR2Q9Y4F9 1068 aa19.13■□□□□ 0.65
PCDHA1-201ENST00000378133 CCP110O43303 1012 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 WDHD1O75717 1129 aaPredicted RBP19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 APPP05067 770 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 KIF6Q6ZMV9 814 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 PFKFB1P16118 471 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 PLA2G12BQ9BX93 195 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 GREM2Q9H772 168 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 ASAP1Q9ULH1 1129 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 PHLPP2Q6ZVD8 1323 aa19.12■□□□□ 0.65
PCDHA1-201ENST00000378133 URI1O94763 535 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 ITGA6P23229 1130 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 ADD2P35612 726 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 CYB5R4Q7L1T6 521 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 CMA1P23946 247 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 HLFQ16534 295 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 TBC1D10CQ8IV04 446 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 ANGEL1Q9UNK9 670 aaKnown RBP19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 COL5A2P05997 1499 aaPredicted RBP19.11■□□□□ 0.65
PCDHA1-201ENST00000378133 IDH1O75874 414 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 IRX3P78415 501 aaPredicted RBP19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 SRRTQ9BXP5 876 aaKnown RBP19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 SENP2Q9HC62 589 aa19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 CNNM1Q9NRU3 951 aa19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 CHRM1P11229 460 aaPredicted RBP19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 METAP2P50579 478 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 NLRP12P59046 1061 aa19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 TTLL11Q8NHH1 800 aa19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 PHKBQ93100 1093 aa19.1■□□□□ 0.65
PCDHA1-201ENST00000378133 SEC31AO94979 1220 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 LMOD1P29536 600 aaPredicted RBP19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 SLC39A14Q15043 492 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 RGS22Q8NE09 1264 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 NEK11Q8NG66 645 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 CARD10Q9BWT7 1032 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 CARD6Q9BX69 1037 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 PIH1D3Q9NQM4 214 aaKnown RBP19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 TNS2Q63HR2 1409 aa19.09■□□□□ 0.65
PCDHA1-201ENST00000378133 MROH7-TTC4A0A0A0MT08 1334 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms