RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 DESP17661 470 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 KRT83P78385 493 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 RRAGBQ5VZM2 374 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 ZCRB1Q8TBF4 217 aaKnown RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 TMX1Q9H3N1 280 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 KAT14Q9H8E8 782 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 PA2G4Q9UQ80 394 aaKnown RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 DISP2A7MBM2 1401 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 SPTY2D1Q68D10 685 aaPredicted RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 POTEAQ6S8J7 498 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 IFNKQ9P0W0 207 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 KDM6AO15550 1401 aaPredicted RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 BRD1O95696 1058 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 MYL5Q02045 173 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 ACSBG1Q96GR2 724 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 PPP1R9BQ96SB3 815 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 KRT86O43790 486 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 BAG3O95817 575 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 PHKG2P15735 406 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 GPTP24298 496 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 MCM6Q14566 821 aa9.55□□□□□ -0.88
VPS36-201ENST00000378060 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
VPS36-201ENST00000378060 TOGARAM1Q9Y4F4 1720 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 ANKRD62A6NC57 917 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 HSF2BPO75031 334 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TACC1O75410 805 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 RPS6KB1P23443 525 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 RNF187Q5TA31 235 aaPredicted RBP9.54□□□□□ -0.88
VPS36-201ENST00000378060 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TRERF1Q96PN7 1200 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS36-201ENST00000378060 DDX21Q9NR30 783 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS36-201ENST00000378060 EXOC1Q9NV70 894 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 V9GYY5 206 aaPredicted RBP9.54□□□□□ -0.88
VPS36-201ENST00000378060 OPA1O60313 960 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CALM1P0DP23 149 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CALM2P0DP24 149 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CALM3P0DP25 149 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 GNAT2P19087 354 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TUBB2AQ13885 445 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 OTUD7AQ8TE49 926 aaPredicted RBP9.54□□□□□ -0.88
VPS36-201ENST00000378060 PLCD4Q9BRC7 762 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TUBB2BQ9BVA1 445 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CLSTN2Q9H4D0 955 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TMOD2Q9NZR1 351 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 SNX14Q9Y5W7 946 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 KCNQ3O43525 872 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CALML3P27482 149 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 RBM5P52756 815 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS36-201ENST00000378060 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 CRNKL1Q9BZJ0 848 aaKnown RBP9.54□□□□□ -0.88
VPS36-201ENST00000378060 ATRNO75882 1429 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 ELP1O95163 1332 aa9.54□□□□□ -0.88
VPS36-201ENST00000378060 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 AFMP43652 599 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 BICDL1Q6ZP65 573 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 CCDC91Q7Z6B0 441 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 PHF23Q9BUL5 403 aaPredicted RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 BRWD3Q6RI45 1802 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 GOLGA6L10A0A0M3HER8 536 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 CCDC172P0C7W6 258 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 STAT6P42226 847 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 DDB1Q16531 1140 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 SPECC1LQ69YQ0 1117 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 SYT10Q6XYQ8 523 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 IMPACTQ9P2X3 320 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 GSTTP1A0A1W2PQM5 241 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 ZNF500O60304 480 aaPredicted RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 ZPR1O75312 459 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 HSPA4P34932 840 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 KIF5AQ12840 1032 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 SLC39A6Q13433 755 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 CNGA4Q8IV77 575 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 CRACR2BQ8N4Y2 399 aaPredicted RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 TRPC5Q9UL62 973 aaPredicted RBP9.53□□□□□ -0.88
VPS36-201ENST00000378060 G2E3Q7L622 706 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 CUL5Q93034 780 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 UBA5Q9GZZ9 404 aa9.53□□□□□ -0.88
VPS36-201ENST00000378060 DNA2P51530 1060 aa9.52□□□□□ -0.88
VPS36-201ENST00000378060 IFIT1BQ5T764 474 aaKnown RBP9.52□□□□□ -0.88
VPS36-201ENST00000378060 GIGYF2Q6Y7W6 1299 aaKnown RBP9.52□□□□□ -0.88
VPS36-201ENST00000378060 MAATS1Q7Z4T9 603 aa9.52□□□□□ -0.88
VPS36-201ENST00000378060 KRI1Q8N9T8 703 aaKnown RBP9.52□□□□□ -0.88
VPS36-201ENST00000378060 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.88
VPS36-201ENST00000378060 JARID2Q92833 1246 aaPredicted RBP9.52□□□□□ -0.88
VPS36-201ENST00000378060 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.52□□□□□ -0.88
VPS36-201ENST00000378060 ABCC4O15439 1325 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms