RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 NTRK3Q16288 839 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 PHKBQ93100 1093 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 ALG1Q9BT22 464 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 NAT10Q9H0A0 1025 aaKnown RBP12.7□□□□□ -0.38
BEST1-201ENST00000378043 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
BEST1-201ENST00000378043 TACC3Q9Y6A5 838 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 ARAP2Q8WZ64 1704 aa12.7□□□□□ -0.38
BEST1-201ENST00000378043 LRP5O75197 1615 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 UBE2Q2LH0YL09 131 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 SKILP12757 684 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 MARCKSP29966 332 aaPredicted RBP12.69□□□□□ -0.38
BEST1-201ENST00000378043 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 RGS22Q8NE09 1264 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 BTG4Q9NY30 223 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 TBC1D2BQ9UPU7 963 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 DOCK2Q92608 1830 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
BEST1-201ENST00000378043 BIN1O00499 593 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 NCAPHQ15003 741 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 TPD52L1Q16890 204 aaPredicted RBP12.69□□□□□ -0.38
BEST1-201ENST00000378043 KRT40Q6A162 431 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 BPIFA3Q9BQP9 254 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
BEST1-201ENST00000378043 EPB41L4AQ9HCS5 686 aaPredicted RBP12.69□□□□□ -0.38
BEST1-201ENST00000378043 DISP2A7MBM2 1401 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 SMTNL1A8MU46 457 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
BEST1-201ENST00000378043 NEMFO60524 1076 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 SLC3A2P08195 630 aaKnown RBP12.68□□□□□ -0.38
BEST1-201ENST00000378043 PTPAQ15257 358 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 NYAP1Q6ZVC0 841 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 ZNF34Q8IZ26 560 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 MAP3K14Q99558 947 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 PUM3Q15397 648 aaKnown RBP12.68□□□□□ -0.38
BEST1-201ENST00000378043 ALX1Q15699 326 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 SHC4Q6S5L8 630 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 SGMS1Q86VZ5 419 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 LPIN2Q92539 896 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
BEST1-201ENST00000378043 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
BEST1-201ENST00000378043 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 NLRP12P59046 1061 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
BEST1-201ENST00000378043 RASGRF1Q13972 1273 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 DZIP3Q86Y13 1208 aaKnown RBP12.67□□□□□ -0.38
BEST1-201ENST00000378043 SPATA5Q8NB90 893 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 TMEM87BQ96K49 555 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 XPO4Q9C0E2 1151 aaKnown RBP12.67□□□□□ -0.38
BEST1-201ENST00000378043 HSD3B7Q9H2F3 369 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 ZBTB43O43298 467 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 U2AF2P26368 475 aaKnown RBP eCLIP12.67□□□□□ -0.38
BEST1-201ENST00000378043 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 AIDAQ96BJ3 306 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 PAXBP1Q9Y5B6 917 aa12.67□□□□□ -0.38
BEST1-201ENST00000378043 PATL2C9JE40 543 aaKnown RBP12.66□□□□□ -0.38
BEST1-201ENST00000378043 CDKL5O76039 1030 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
BEST1-201ENST00000378043 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 IFNKQ9P0W0 207 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 PPP6R2O75170 966 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 MBD4O95243 580 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 IL6STP40189 918 aaPredicted RBP12.66□□□□□ -0.38
BEST1-201ENST00000378043 TMEM67Q5HYA8 995 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 PDCL2Q8N4E4 241 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 MAGEB6Q8N7X4 407 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 TIGD1Q96MW7 591 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 CLIC6Q96NY7 704 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 MROH5Q6ZUA9 1318 aa12.66□□□□□ -0.38
BEST1-201ENST00000378043 FAM237AA0A1B0GTK4 181 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
BEST1-201ENST00000378043 LIFRP42702 1097 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 SYKP43405 635 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
BEST1-201ENST00000378043 SYTL4Q96C24 671 aaPredicted RBP12.65□□□□□ -0.38
BEST1-201ENST00000378043 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 KCND1Q9NSA2 647 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 TRMT1Q9NXH9 659 aaKnown RBP12.65□□□□□ -0.38
BEST1-201ENST00000378043 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 PRKAB2O43741 272 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 ZRSR1Q15695 479 aaKnown RBP12.65□□□□□ -0.38
BEST1-201ENST00000378043 SUSD4Q5VX71 490 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.65□□□□□ -0.38
BEST1-201ENST00000378043 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 IMPACTQ9P2X3 320 aa12.65□□□□□ -0.38
BEST1-201ENST00000378043 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
BEST1-201ENST00000378043 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms