RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 HMG20BQ9P0W2 317 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 UBR2Q8IWV8 1755 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 RPS6KB1P23443 525 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 GBP6Q6ZN66 633 aa17.82■□□□□ 0.44
FXN-201ENST00000377270 ELF1P32519 619 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
FXN-201ENST00000377270 SMC1AQ14683 1233 aaKnown RBP17.81■□□□□ 0.44
FXN-201ENST00000377270 LRRC24Q50LG9 513 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 FMNL3Q8IVF7 1028 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 MCMDC2Q4G0Z9 681 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 ANO6Q4KMQ2 910 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
FXN-201ENST00000377270 CPLX2Q6PUV4 134 aaKnown RBP17.81■□□□□ 0.44
FXN-201ENST00000377270 TDRD7Q8NHU6 1098 aaKnown RBP17.81■□□□□ 0.44
FXN-201ENST00000377270 CPSF2Q9P2I0 782 aaKnown RBP17.81■□□□□ 0.44
FXN-201ENST00000377270 JCADQ9P266 1359 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 USP27XA6NNY8 438 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 CCDC144CPQ8IYA2 1237 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 TACO1Q9BSH4 297 aaKnown RBP17.8■□□□□ 0.44
FXN-201ENST00000377270 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 ZNF609O15014 1411 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 EYA2O00167 538 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 NEMFO60524 1076 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 HNRNPH1P31943 449 aaKnown RBP17.8■□□□□ 0.44
FXN-201ENST00000377270 LRRC8AQ8IWT6 810 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 TEX11Q8IYF3 940 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 KBTBD3Q8NAB2 608 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 KLHL23Q8NBE8 558 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 KAT2BQ92831 832 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 ASAP1Q9ULH1 1129 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 TNS2Q63HR2 1409 aa17.8■□□□□ 0.44
FXN-201ENST00000377270 VPS37CA5D8V6 355 aaPredicted RBP17.79■□□□□ 0.44
FXN-201ENST00000377270 SEC31AO94979 1220 aaKnown RBP17.79■□□□□ 0.44
FXN-201ENST00000377270 CDC25BP30305 580 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 CAMK4Q16566 473 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 ARHGAP29Q52LW3 1261 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 GPR108Q9NPR9 543 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 PSMD2Q13200 908 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 TCIRG1Q13488 830 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 ARGLU1Q9NWB6 273 aaPredicted RBP17.79■□□□□ 0.44
FXN-201ENST00000377270 NUP188Q5SRE5 1749 aa17.79■□□□□ 0.44
FXN-201ENST00000377270 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 MYBL2P10244 700 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 KRT32Q14532 448 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 DNAJC10Q8IXB1 793 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 CCDC26Q8TAB7 109 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 STAG1Q8WVM7 1258 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 PIGBQ92521 554 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 PUS3Q9BZE2 481 aaKnown RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 ALDH8A1Q9H2A2 487 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 PAG1Q9NWQ8 432 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 RFX7Q2KHR2 1363 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 A0A087WUV0 522 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 USP8P40818 1118 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 CCNHP51946 323 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 LARP1BQ659C4 914 aaKnown RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 JPH2Q9BR39 696 aaPredicted RBP17.78■□□□□ 0.44
FXN-201ENST00000377270 BTG4Q9NY30 223 aa17.78■□□□□ 0.44
FXN-201ENST00000377270 PAPPAQ13219 1627 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 ANKRD18BA2A2Z9 1011 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 SASH3O75995 380 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 SF3A1Q15459 793 aaKnown RBP17.77■□□□□ 0.44
FXN-201ENST00000377270 LRRN4CLQ8ND94 238 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 ZNF483Q8TF39 744 aaPredicted RBP17.77■□□□□ 0.44
FXN-201ENST00000377270 CCDC34Q96HJ3 373 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 NEK1Q96PY6 1258 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 TEX13AQ9BXU3 409 aaPredicted RBP17.77■□□□□ 0.44
FXN-201ENST00000377270 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
FXN-201ENST00000377270 STK3Q13188 491 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 KCNV1Q6PIU1 500 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 LRRC31Q6UY01 552 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 CKAP2LQ8IYA6 745 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 TRIM6Q9C030 488 aaPredicted RBP17.77■□□□□ 0.43
FXN-201ENST00000377270 VEZTQ9HBM0 779 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 ABCA3Q99758 1704 aa17.77■□□□□ 0.43
FXN-201ENST00000377270 FAM163BP0C2L3 166 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 ARMC3Q5W041 872 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 TRIM74Q86UV6 250 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 TRIM73Q86UV7 250 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 TJP1Q07157 1748 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 AP1G2O75843 785 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 CIAO1O76071 339 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 CYP21A2P08686 494 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 KIF6Q6ZMV9 814 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 TMTC2Q8N394 836 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 N4BP2L2Q92802 583 aaPredicted RBP17.76■□□□□ 0.43
FXN-201ENST00000377270 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
FXN-201ENST00000377270 SH3GL3Q99963 347 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 KDM4CQ9H3R0 1056 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 CEP126Q9P2H0 1117 aa17.76■□□□□ 0.43
FXN-201ENST00000377270 KDM4FA0A1W2PPD8 638 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms