RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LETM2Q2VYF4 491 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 CCDC40Q4G0X9 1142 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 ZNF771Q7L3S4 317 aaPredicted RBP20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 IFNL3Q8IZI9 196 aa20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 ZNF397Q8NF99 534 aaPredicted RBP20.52■□□□□ 0.88
PTPDC1-202ENST00000375360 SCLT1Q96NL6 688 aa20.52■□□□□ 0.87
PTPDC1-202ENST00000375360 UBASH3AP57075 661 aa20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 CCDC186Q7Z3E2 898 aa20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 UIMC1Q96RL1 719 aa20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 TTC12Q9H892 705 aaPredicted RBP20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 CLEC11AQ9Y240 323 aa20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 CPSF1Q10570 1443 aaKnown RBP20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 TDRD12Q587J7 1177 aaKnown RBP20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 SEPT12Q8IYM1 358 aa20.51■□□□□ 0.87
PTPDC1-202ENST00000375360 ASIC1P78348 528 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 SUSD4Q5VX71 490 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 EHMT1Q9H9B1 1298 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 KCNQ2O43526 872 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 URI1O94763 535 aaPredicted RBP20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 LSG1Q9H089 658 aaKnown RBP20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 SCNN1DP51172 638 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 LUZP1Q86V48 1076 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 KIAA0825Q8IV33 1275 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 PTPRMP28827 1452 aa20.5■□□□□ 0.87
PTPDC1-202ENST00000375360 SPDYE3A6NKU9 549 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 GNA11P29992 359 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 PLS1Q14651 629 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 EXOC1Q9NV70 894 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 DEXIO95424 95 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 CYP21A2P08686 494 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 SLFNL1Q499Z3 407 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 PIK3AP1Q6ZUJ8 805 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 MAP4K1Q92918 833 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 CAVIN2O95810 425 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 PPARAQ07869 468 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 KRT40Q6A162 431 aa20.49■□□□□ 0.87
PTPDC1-202ENST00000375360 KIDINS220Q9ULH0 1771 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 TTLL11Q8NHH1 800 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 INO80Q9ULG1 1556 aaPredicted RBP20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 GRM1Q13255 1194 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 UVSSAQ2YD98 709 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 KRI1Q8N9T8 703 aaKnown RBP20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 LLPHQ9BRT6 129 aaKnown RBP20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 TNNT1P13805 278 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 SPA17Q15506 151 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 ZSWIM6Q9HCJ5 1215 aa20.48■□□□□ 0.87
PTPDC1-202ENST00000375360 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 ANO1Q5XXA6 986 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 QRICH2Q9H0J4 1663 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 USP31Q70CQ4 1352 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 ZNF804BA4D1E1 1349 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 PALLDQ8WX93 1383 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 H7C1W4 665 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 POLA2Q14181 598 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 SYCP3Q8IZU3 236 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 MMRN2Q9H8L6 949 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 VPS54Q9P1Q0 977 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 CAMSAP1Q5T5Y3 1602 aa20.47■□□□□ 0.87
PTPDC1-202ENST00000375360 KIF20AO95235 890 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 SERPINB2P05120 415 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 ALDH1B1P30837 517 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 JAKMIP3Q5VZ66 844 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 FBXO3Q9UK99 471 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 FGFR1OPO95684 399 aaKnown RBP20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 PRKG1Q13976 671 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 KRT27Q7Z3Y8 459 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 BAG6P46379 1132 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 GTF3C6Q969F1 213 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 PYM1Q9BRP8 204 aaKnown RBP20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 USP40Q9NVE5 1235 aa20.46■□□□□ 0.87
PTPDC1-202ENST00000375360 BRD1O95696 1058 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 USP8P40818 1118 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 TEX35Q5T0J7 233 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 KRT79Q5XKE5 535 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 UBXN4Q92575 508 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 ZSCAN12O43309 604 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 SP4Q02446 784 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 RILPL1Q5EBL4 403 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 KIF18AQ8NI77 898 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 CIAO1O76071 339 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 NBPF26B4DH59 902 aa20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 TBCAO75347 108 aaKnown RBP20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 SSR1P43307 286 aaKnown RBP20.45■□□□□ 0.86
PTPDC1-202ENST00000375360 UBE4AQ14139 1066 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms