RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 SDCCAG3Q96C92 435 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 GLT8D2Q9H1C3 349 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 SPATS2LQ9NUQ6 558 aaKnown RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 CALUO43852 315 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 F13A1P00488 732 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 GJC1P36383 396 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 SMTNP53814 917 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC152Q4G0S7 254 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 MYO18AQ92614 2054 aaKnown RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
HSPG2-203ENST00000374695 EVI5O60447 810 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 PPFIA4O75335 1185 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 KRT3P12035 628 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 INPP1P49441 399 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 EVCP57679 992 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 CCDC125Q86Z20 511 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 GSDMBQ8TAX9 411 aa9.34□□□□□ -0.91
HSPG2-203ENST00000374695 MYO9BQ13459 2157 aa9.34□□□□□ -0.92
HSPG2-203ENST00000374695 MCMDC2Q4G0Z9 681 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 GOLGA5Q8TBA6 731 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 SEPT10Q9P0V9 454 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 ST5P78524 1137 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 SMARCC2Q8TAQ2 1214 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 SPOPO43791 374 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 RRS1Q15050 365 aaKnown RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 HEATR3Q7Z4Q2 680 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 TRIM4Q9C037 500 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 CROCCQ5TZA2 2017 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 HSP90AA5PQ58FG0 334 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 PPANQ9NQ55 473 aaKnown RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 STX8Q9UNK0 236 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 PLCD1P51178 756 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 ZMAT2Q96NC0 199 aaKnown RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 HSPA8P11142 646 aaKnown RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 FLIIQ13045 1269 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 UAP1Q16222 522 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 VAT1LQ9HCJ6 419 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 NUCB1Q02818 461 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 EXOC7Q9UPT5 735 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 TTC41PQ6P2S7 1318 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 ISM2Q6H9L7 571 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 ZMYM3Q14202 1370 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
HSPG2-203ENST00000374695 HHATQ5VTY9 493 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 TLDC2A0PJX2 215 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 DTHD1Q6ZMT9 781 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 FLOT1O75955 427 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 HAUS3Q68CZ6 603 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 TMX3Q96JJ7 454 aa9.33□□□□□ -0.92
HSPG2-203ENST00000374695 PHBP35232 272 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 RAB3GAP1Q15042 981 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 Q6ZUG5 572 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 TEX2Q8IWB9 1127 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 NCOA1Q15788 1441 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 PAK2Q13177 524 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 TAF12Q16514 161 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 MCM10Q7L590 875 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 PANK2Q9BZ23 570 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 MAP3K2Q9Y2U5 619 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 SCAF11Q99590 1463 aaKnown RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 CERS3Q8IU89 383 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 LEO1Q8WVC0 666 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 WDR46O15213 610 aaKnown RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 RASA3Q14644 834 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 MAIP1Q8WWC4 291 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 BAZ2BQ9UIF8 2168 aaKnown RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 MYCNP04198 464 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 TRIM27P14373 513 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 SYNRGQ9UMZ2 1314 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 DCAF17Q5H9S7 520 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 ANKRD20A3Q5VUR7 823 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 DHX58Q96C10 678 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 ZKSCAN3Q9BRR0 538 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 CCDC8Q9H0W5 538 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-203ENST00000374695 RUFY3Q7L099 469 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 IGSF22Q8N9C0 903 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 TMOD4Q9NZQ9 345 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 IFNKQ9P0W0 207 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 CFAP221Q4G0U5 840 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 SYT10Q6XYQ8 523 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 GTF3C6Q969F1 213 aa9.32□□□□□ -0.92
HSPG2-203ENST00000374695 DNMBPQ6XZF7 1577 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 CA8P35219 290 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 MED4Q9NPJ6 270 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 COG7P83436 770 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 DACT1Q9NYF0 836 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 RNF40O75150 1001 aa9.31□□□□□ -0.92
HSPG2-203ENST00000374695 EPS15L1Q9UBC2 864 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 244.5 ms