RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 WDR66Q8TBY9 1149 aa17.26■□□□□ 0.35
CXCL12-202ENST00000374426 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
CXCL12-202ENST00000374426 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
CXCL12-202ENST00000374426 SLC9C1Q4G0N8 1177 aa17.25■□□□□ 0.35
CXCL12-202ENST00000374426 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
CXCL12-202ENST00000374426 ARHGAP39Q9C0H5 1083 aa17.25■□□□□ 0.35
CXCL12-202ENST00000374426 DAGLAQ9Y4D2 1042 aa17.25■□□□□ 0.35
CXCL12-202ENST00000374426 WDHD1O75717 1129 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-202ENST00000374426 PRDX5P30044 214 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 INPP5BP32019 993 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-202ENST00000374426 DIXDC1Q155Q3 683 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 FAM151AQ8WW52 585 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 TMEM106CQ9BVX2 250 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
CXCL12-202ENST00000374426 PPATQ06203 517 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 NFIAQ12857 509 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 SIL1Q9H173 461 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 ZSWIM8A7E2V4 1837 aa17.23■□□□□ 0.35
CXCL12-202ENST00000374426 MYH13Q9UKX3 1938 aa17.22■□□□□ 0.35
CXCL12-202ENST00000374426 TCP10Q12799 353 aa17.22■□□□□ 0.35
CXCL12-202ENST00000374426 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
CXCL12-202ENST00000374426 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-202ENST00000374426 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
CXCL12-202ENST00000374426 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
CXCL12-202ENST00000374426 CIAO1O76071 339 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-202ENST00000374426 KIF22Q14807 665 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 HABP4Q5JVS0 413 aaKnown RBP17.21■□□□□ 0.35
CXCL12-202ENST00000374426 C17orf99Q6UX52 265 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 CEP126Q9P2H0 1117 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 FAM198AQ9UFP1 575 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 FBXO3Q9UK99 471 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 KCNH4Q9UQ05 1017 aa17.21■□□□□ 0.35
CXCL12-202ENST00000374426 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
CXCL12-202ENST00000374426 GNRH1P01148 92 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
CXCL12-202ENST00000374426 CTGFP29279 349 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 MOGSQ13724 837 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 ANKRD23Q86SG2 305 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 RANBP2P49792 3224 aaKnown RBP17.2■□□□□ 0.34
CXCL12-202ENST00000374426 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
CXCL12-202ENST00000374426 PDHXO00330 501 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 PHKA1P46020 1223 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 NOL9Q5SY16 702 aaKnown RBP17.19■□□□□ 0.34
CXCL12-202ENST00000374426 ZFPM1Q8IX07 1006 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 USP40Q9NVE5 1235 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
CXCL12-202ENST00000374426 CPA4Q9UI42 421 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
CXCL12-202ENST00000374426 ATRNL1Q5VV63 1379 aa17.18■□□□□ 0.34
CXCL12-202ENST00000374426 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
CXCL12-202ENST00000374426 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
CXCL12-202ENST00000374426 TRIM47Q96LD4 638 aa17.18■□□□□ 0.34
CXCL12-202ENST00000374426 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
CXCL12-202ENST00000374426 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
CXCL12-202ENST00000374426 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
CXCL12-202ENST00000374426 TRIOBPQ9H2D6 2365 aa17.17■□□□□ 0.34
CXCL12-202ENST00000374426 SEMA3EO15041 775 aa17.17■□□□□ 0.34
CXCL12-202ENST00000374426 ADORA1P30542 326 aa17.17■□□□□ 0.34
CXCL12-202ENST00000374426 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
CXCL12-202ENST00000374426 PRMT2P55345 433 aa17.17■□□□□ 0.34
CXCL12-202ENST00000374426 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
CXCL12-202ENST00000374426 AK9Q5TCS8 1911 aa17.17■□□□□ 0.34
CXCL12-202ENST00000374426 ZBTB22O15209 634 aa17.16■□□□□ 0.34
CXCL12-202ENST00000374426 PSMC4P43686 418 aa17.16■□□□□ 0.34
CXCL12-202ENST00000374426 CCDC102BQ68D86 513 aa17.16■□□□□ 0.34
CXCL12-202ENST00000374426 COPRSQ9NQ92 184 aa17.16■□□□□ 0.34
CXCL12-202ENST00000374426 SRRDQ9UH36 339 aa17.16■□□□□ 0.34
CXCL12-202ENST00000374426 RFX7Q2KHR2 1363 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 PHF20L1A8MW92 1017 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 OSBPP22059 807 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 RGS3P49796 1198 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 MTFR1Q15390 333 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 GPAT2Q6NUI2 795 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 SH3BP5LQ7L8J4 393 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 MEIS3Q99687 375 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 IDI2Q9BXS1 227 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 GAKO14976 1311 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 SZT2Q5T011 3432 aa17.15■□□□□ 0.34
CXCL12-202ENST00000374426 CXCL11O14625 94 aa17.14■□□□□ 0.33
CXCL12-202ENST00000374426 ENTPD3O75355 529 aa17.14■□□□□ 0.33
CXCL12-202ENST00000374426 CT47B1P0C2W7 299 aaPredicted RBP17.14■□□□□ 0.33
CXCL12-202ENST00000374426 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
CXCL12-202ENST00000374426 FMNL1O95466 1100 aaPredicted RBP17.13■□□□□ 0.33
CXCL12-202ENST00000374426 CYP2C8P10632 490 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 BCRP11274 1271 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 HOXD10P28358 340 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 TIMM10P62072 90 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 SCYL3Q8IZE3 742 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
CXCL12-202ENST00000374426 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
CXCL12-202ENST00000374426 PARK7Q99497 189 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms