RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 SSC5DA1L4H1 1573 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 UNCXA6NJT0 531 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 USP2O75604 605 aaPredicted RBP24.55■■□□□ 1.52
TMEM53-205ENST00000372244 AACSQ86V21 672 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 DZIP1Q86YF9 867 aaKnown RBP24.55■■□□□ 1.52
TMEM53-205ENST00000372244 RASAL3Q86YV0 1011 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 CDAN1Q8IWY9 1227 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 IL1RAPL2Q9NP60 686 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 SNRKQ9NRH2 765 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 ANGEL1Q9UNK9 670 aaKnown RBP24.55■■□□□ 1.52
TMEM53-205ENST00000372244 FZD1Q9UP38 647 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 THSD7BQ9C0I4 1608 aa24.55■■□□□ 1.52
TMEM53-205ENST00000372244 FOXN1O15353 648 aa24.54■■□□□ 1.52
TMEM53-205ENST00000372244 NSUN4Q96CB9 384 aaKnown RBP24.54■■□□□ 1.52
TMEM53-205ENST00000372244 USP40Q9NVE5 1235 aa24.54■■□□□ 1.52
TMEM53-205ENST00000372244 CYP2E1P05181 493 aaPredicted RBP24.53■■□□□ 1.52
TMEM53-205ENST00000372244 CLASRPQ8N2M8 674 aaKnown RBP24.53■■□□□ 1.52
TMEM53-205ENST00000372244 GPR75-ASB3A0A0A6YYF3 556 aa24.52■■□□□ 1.52
TMEM53-205ENST00000372244 AIDAQ96BJ3 306 aa24.52■■□□□ 1.52
TMEM53-205ENST00000372244 APBB1O00213 710 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 IGSF3O75054 1194 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 KIF23Q02241 960 aaPredicted RBP24.51■■□□□ 1.51
TMEM53-205ENST00000372244 NFIAQ12857 509 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 FAM151AQ8WW52 585 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 LRP2BPQ9P2M1 347 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 ZAP70P43403 619 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 IDI2Q9BXS1 227 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 DCTPP1Q9H773 170 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 RAI14Q9P0K7 980 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 FAM198AQ9UFP1 575 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 PCDHB15Q9Y5E8 787 aa24.51■■□□□ 1.51
TMEM53-205ENST00000372244 MROH7-TTC4A0A0A0MT08 1334 aa24.5■■□□□ 1.51
TMEM53-205ENST00000372244 AKAP11Q9UKA4 1901 aa24.5■■□□□ 1.51
TMEM53-205ENST00000372244 LDHCP07864 332 aa24.5■■□□□ 1.51
TMEM53-205ENST00000372244 IREB2P48200 963 aaKnown RBP24.5■■□□□ 1.51
TMEM53-205ENST00000372244 CTCFP49711 727 aaPredicted RBP24.5■■□□□ 1.51
TMEM53-205ENST00000372244 GSTO1P78417 241 aa24.5■■□□□ 1.51
TMEM53-205ENST00000372244 CSRNP1Q96S65 589 aa24.5■■□□□ 1.51
TMEM53-205ENST00000372244 REM2Q8IYK8 340 aaPredicted RBP24.49■■□□□ 1.51
TMEM53-205ENST00000372244 SLC10A4Q96EP9 437 aa24.49■■□□□ 1.51
TMEM53-205ENST00000372244 BEGAINQ9BUH8 593 aa24.49■■□□□ 1.51
TMEM53-205ENST00000372244 BTDP43251 543 aa24.48■■□□□ 1.51
TMEM53-205ENST00000372244 CLMNQ96JQ2 1002 aa24.48■■□□□ 1.51
TMEM53-205ENST00000372244 MYH2Q9UKX2 1941 aa24.48■■□□□ 1.51
TMEM53-205ENST00000372244 CA12O43570 354 aa24.47■■□□□ 1.51
TMEM53-205ENST00000372244 IFIT2P09913 472 aaKnown RBP24.47■■□□□ 1.51
TMEM53-205ENST00000372244 RHBDL3P58872 404 aa24.47■■□□□ 1.51
TMEM53-205ENST00000372244 ZFPM1Q8IX07 1006 aa24.47■■□□□ 1.51
TMEM53-205ENST00000372244 CRBNQ96SW2 442 aa24.47■■□□□ 1.51
TMEM53-205ENST00000372244 PIH1D3Q9NQM4 214 aaKnown RBP24.47■■□□□ 1.51
TMEM53-205ENST00000372244 RPAP1Q9BWH6 1393 aaPredicted RBP24.47■■□□□ 1.51
TMEM53-205ENST00000372244 WDHD1O75717 1129 aaPredicted RBP24.46■■□□□ 1.51
TMEM53-205ENST00000372244 MAP4K4O95819 1239 aaPredicted RBP24.46■■□□□ 1.51
TMEM53-205ENST00000372244 TCP10Q12799 353 aa24.46■■□□□ 1.51
TMEM53-205ENST00000372244 SPRYD7Q5W111 196 aa24.46■■□□□ 1.51
TMEM53-205ENST00000372244 ANKRD13AQ8IZ07 590 aa24.46■■□□□ 1.51
TMEM53-205ENST00000372244 HOOK2Q96ED9 719 aa24.46■■□□□ 1.51
TMEM53-205ENST00000372244 LRRCC1Q9C099 1032 aa24.46■■□□□ 1.51
TMEM53-205ENST00000372244 ENTPD3O75355 529 aa24.45■■□□□ 1.51
TMEM53-205ENST00000372244 COL13A1Q5TAT6 717 aaPredicted RBP24.45■■□□□ 1.51
TMEM53-205ENST00000372244 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.45■■□□□ 1.51
TMEM53-205ENST00000372244 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.45■■□□□ 1.51
TMEM53-205ENST00000372244 PRDM10Q9NQV6 1147 aa24.45■■□□□ 1.51
TMEM53-205ENST00000372244 RFX7Q2KHR2 1363 aa24.45■■□□□ 1.5
TMEM53-205ENST00000372244 NPM3O75607 178 aaKnown RBP24.45■■□□□ 1.5
TMEM53-205ENST00000372244 HSPA8P11142 646 aaKnown RBP24.45■■□□□ 1.5
TMEM53-205ENST00000372244 RGS3P49796 1198 aa24.45■■□□□ 1.5
TMEM53-205ENST00000372244 MAP3K9P80192 1104 aa24.45■■□□□ 1.5
TMEM53-205ENST00000372244 NAA16Q6N069 864 aaPredicted RBP24.45■■□□□ 1.5
TMEM53-205ENST00000372244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.45■■□□□ 1.5
TMEM53-205ENST00000372244 NDUFB9Q9Y6M9 179 aa24.45■■□□□ 1.5
TMEM53-205ENST00000372244 TM4SF4P48230 202 aa24.44■■□□□ 1.5
TMEM53-205ENST00000372244 LBX1P52954 281 aa24.44■■□□□ 1.5
TMEM53-205ENST00000372244 ANTXR1Q9H6X2 564 aa24.44■■□□□ 1.5
TMEM53-205ENST00000372244 PPP4CP60510 307 aa24.43■■□□□ 1.5
TMEM53-205ENST00000372244 DDX4Q9NQI0 724 aaKnown RBP24.43■■□□□ 1.5
TMEM53-205ENST00000372244 SMARCA5O60264 1052 aaPredicted RBP24.42■■□□□ 1.5
TMEM53-205ENST00000372244 ZBTB48P10074 688 aaPredicted RBP24.42■■□□□ 1.5
TMEM53-205ENST00000372244 SH3BP5LQ7L8J4 393 aa24.42■■□□□ 1.5
TMEM53-205ENST00000372244 ADGRA1Q86SQ6 560 aa24.42■■□□□ 1.5
TMEM53-205ENST00000372244 RNF186Q9NXI6 227 aa24.42■■□□□ 1.5
TMEM53-205ENST00000372244 MAP3K10Q02779 954 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 DCAF15Q66K64 600 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 TMED8Q6PL24 325 aaPredicted RBP24.41■■□□□ 1.5
TMEM53-205ENST00000372244 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 WNK4Q96J92 1243 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 SAGE1Q9NXZ1 904 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 ZNF112Q9UJU3 913 aa24.41■■□□□ 1.5
TMEM53-205ENST00000372244 ATP5JP18859 108 aa24.4■■□□□ 1.5
TMEM53-205ENST00000372244 AAMPQ13685 434 aa24.4■■□□□ 1.5
TMEM53-205ENST00000372244 VGLL4Q14135 290 aa24.4■■□□□ 1.5
TMEM53-205ENST00000372244 IDH1O75874 414 aaKnown RBP24.39■■□□□ 1.5
TMEM53-205ENST00000372244 BAG3O95817 575 aa24.39■■□□□ 1.5
TMEM53-205ENST00000372244 GJA5P36382 358 aa24.39■■□□□ 1.5
TMEM53-205ENST00000372244 MKRN3Q13064 507 aaKnown RBP24.39■■□□□ 1.5
TMEM53-205ENST00000372244 BCL11AQ9H165 835 aa24.39■■□□□ 1.5
TMEM53-205ENST00000372244 DDTLA6NHG4 134 aaPredicted RBP24.38■■□□□ 1.49
TMEM53-205ENST00000372244 INHBEP58166 350 aa24.38■■□□□ 1.49
TMEM53-205ENST00000372244 TTF1Q15361 905 aaPredicted RBP24.38■■□□□ 1.49
TMEM53-205ENST00000372244 SH3RF3Q8TEJ3 882 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms