RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZBBXA8MT70 800 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 NLRP6P59044 892 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 PAK2Q13177 524 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 FAM204AQ9H8W3 233 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 KRT5P13647 590 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 HMG20BQ9P0W2 317 aa17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 RRP15Q9Y3B9 282 aaKnown RBP17.06■□□□□ 0.32
GTF3C4-201ENST00000372146 ANKRD30BQ9BXX2 1392 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 RGS16O15492 202 aaPredicted RBP17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 KAT14Q9H8E8 782 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 CCDC159P0C7I6 412 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 KRT71Q3SY84 523 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 HAND2P61296 217 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 PROCA1Q8NCQ7 364 aaPredicted RBP17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 TMOD2Q9NZR1 351 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 ORC6Q9Y5N6 252 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 RPS6KA2Q15349 733 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 E2F4Q16254 413 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 CASC4Q6P4E1 433 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 CFAP61Q8NHU2 1237 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 E2F5Q15329 346 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 PSMB7Q99436 277 aa17.05■□□□□ 0.32
GTF3C4-201ENST00000372146 EFCAB13Q8IY85 973 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 RANBP1P43487 201 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 AKNAD1Q5T1N1 836 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 F13A1P00488 732 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 KSR1Q8IVT5 923 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 NBPF3Q9H094 633 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 CREB3O43889 395 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 PPFIA4O75335 1185 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 CEP70Q8NHQ1 597 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 FAM212AQ96EL1 285 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 EPS15L1Q9UBC2 864 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 TTF2Q9UNY4 1162 aaKnown RBP17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
GTF3C4-201ENST00000372146 KRT9P35527 623 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 IGSF22Q8N9C0 903 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 ZNF644Q9H582 1327 aaPredicted RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 CTNNA1P35221 906 aaKnown RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 ALG1Q9BT22 464 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 BMP15O95972 392 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 GABPAQ06546 454 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 SLC24A3Q9HC58 644 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 MAFGO15525 162 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 STK10O94804 968 aaKnown RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 IGF1RP08069 1367 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 NRBF2Q96F24 287 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 IL1RL1Q01638 556 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
GTF3C4-201ENST00000372146 TRPA1O75762 1119 aa17.02■□□□□ 0.32
GTF3C4-201ENST00000372146 GOLGA8KD6RF30 607 aa17.02■□□□□ 0.32
GTF3C4-201ENST00000372146 KIFAP3Q92845 792 aa17.02■□□□□ 0.32
GTF3C4-201ENST00000372146 LMNB2Q03252 620 aa17.02■□□□□ 0.32
GTF3C4-201ENST00000372146 EEF1B2P24534 225 aaKnown RBP17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 BCAS4Q8TDM0 211 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 ANKRD20A4Q4UJ75 823 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 ANKRD20A8PQ5CZ79 823 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 ANKRD20A2Q5SQ80 823 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 ANKRD20A1Q5TYW2 823 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 LRGUKQ96M69 825 aa17.02■□□□□ 0.31
GTF3C4-201ENST00000372146 PDE4BQ07343 736 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 CCDC13Q8IYE1 715 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 CEP19Q96LK0 163 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 BIRC2Q13490 618 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 PLEKHA4Q9H4M7 779 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 ARHGEF9O43307 516 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 ATP6V1E1P36543 226 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 KLHL7Q8IXQ5 586 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 NLRP7Q8WX94 980 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 CCT5P48643 541 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 TEX11Q8IYF3 940 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 PPWD1Q96BP3 646 aaKnown RBP17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 SPTLC2O15270 562 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 IFT88Q13099 833 aa17.01■□□□□ 0.31
GTF3C4-201ENST00000372146 ELP1O95163 1332 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms